Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0887 ATGGGAATATATCTCAGCACTCCCAAAACTGAAAAGTTTTCTGGAGATGGTGAAAGTGAGCGTCTTAGATATGGTTTATCATCCATGCAAGGGTGGCGCGCAACAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGATTCGACTTCATTTTTTGGTGTCTATGATGGTCATGGAGGTAAGGTGGTTGCGAAGTTTTGTGCAAAGTTTCTCCACCAAGAGGTGCTAAAAAGTGAAGCATACGTAACTGGAGATATAGGAACCTCCCTTCAGAAATCCTTTTTAAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAATATTGGGGGATAAGATAAACAAGTTTACTGGGATGATAGAAGGTTTGATTTGGTCACCAAGAAGCAGTGATGGTATCCGAGTTGATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCGGGAAGCACTGCCTGTGTTGCAGTTATTAGAAACAACCAACTTGTTGTTGCAAATGCTGGTGATTCGCGATGTGTGATATCTCGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCACGCTGGGCGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAATTTCTTCCTGCTGAGAAACAAATTTTAACTTCCAATCCAGACATAAACACTGTTGAGCTCTGTGACGAAGATGAATTTGTGGTGTTAGCTTGTGATGGCATATGGGATTGCATGTCAAGTCAACAACTCGTAGATTTTATTCATGAACAATTGCAATCGGAAACGAAACTTTCTGTTGTGTGTGAAAGAGTACTTGACCGGTGTTTGGCACCATCAACTGCCGTTGGCGAGGGATGTGACAATATGACCATGATCTTGGTGCAGTTCAAAAGACCTGCTCAGTCCAGTGCATCAACAGAAGAGCAATCCTCTTCAAACGGACAAGCTGAACCTGAAACACAACTAGAGAGAAGTGAAAGTTAG 1080 0.4204 MGIYLSTPKTEKFSGDGESERLRYGLSSMQGWRATMEDAHAAYTDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQEVLKSEAYVTGDIGTSLQKSFLRMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSDGIRVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQILTSNPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFIHEQLQSETKLSVVCERVLDRCLAPSTAVGEGCDNMTMILVQFKRPAQSSASTEEQSSSNGQAEPETQLERSES* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0887 359 MobiDBLite consensus disorder prediction 331 359 - -
Pvu9g0887 359 PANTHER PROTEIN PHOSPHATASE 2C 1 340 IPR015655 GO:0004722|GO:0006470
Pvu9g0887 359 Pfam Protein phosphatase 2C 154 312 IPR001932 -
Pvu9g0887 359 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Pvu9g0887 359 MobiDBLite consensus disorder prediction 331 352 - -
Pvu9g0887 359 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Pvu9g0887 359 SMART PP2C_4 13 326 IPR001932 -
Pvu9g0887 359 CDD PP2Cc 23 328 IPR001932 -
Pvu9g0887 359 Gene3D - 1 329 IPR036457 -
Pvu9g0887 359 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 340 - -
Pvu9g0887 359 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Pvu9g0887 359 SUPERFAMILY PP2C-like 3 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0887 Pvu-Chr9 13564144 13576063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0887 1 340 PP2C-type Phosphatase Gene Family AT2G25070 76.540 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0887 K17499 - gmx:100787778 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0887 9 13564144 13576063 Pvu9g0887 9 13564144 13576063 ECH
Pvu1g0419 1 4191175 4198491 Pvu9g0887 9 13564144 13576063 PCT