Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0877 ATGAGCTTTCCCAATTCAGTTTTACCTGCTCCAAACCAGGTTCAAAATTCCCAGAATGCAATTGTGAGCGGTGGGGGTACAAGTCAAAATGGAAAATTCAGCTATGGGTATGCTAGCTCTCCCGGCAAGAGATCTTCAATGGAAGATTTTTACGACACAAGAATTGATGGTGTTAATGGTCAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGAAAAATTTGTTTAGTAATTTGATCAATCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATACAATCATACCGATTCTGAGTTTCTGAAGTCAGAAAATAGTAATAATAAAGATGCTGGATCAACTGCTTCCACTGCGATTTTAGTTGGTGATCGCTTGCTTGTTGCAAATGTTGGGGATTCCAGAGCTGTTATATGCAGGGGTGGTAATGCTATTGCTGTTTCTCGAGATCACAAACCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGATTTGTTATATGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGAGCGTTTGGTGATAGACTCCTAAAGCAATATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAGTTGACAACTCCCTTGAGTTTCTTATCCTGGCTAGTGATGGACTATGGGATGTTGTCTCAAATGAGGAAGCAGTTGCTATGATCAAATCAATGGAAGATGCTGAGGAAGCAGCAAAGAGGTTGATGCAAGAAGCATATAAGAGAGGTAGTGCTGACAATATCACATGTGTTGTGGTTCGTTTCTTGACTAACCAAGGCATTTCTTCTCATAGTAGTAGTTCTGGAGGTGCTAATAAGGCTATCAAAAAATGA 909 0.4103 MSFPNSVLPAPNQVQNSQNAIVSGGGTSQNGKFSYGYASSPGKRSSMEDFYDTRIDGVNGQIVGLFGVFDGHGGARAAEYVKKNLFSNLINHPKFISDTKSAISDAYNHTDSEFLKSENSNNKDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDNSLEFLILASDGLWDVVSNEEAVAMIKSMEDAEEAAKRLMQEAYKRGSADNITCVVVRFLTNQGISSHSSSSGGANKAIKK* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0877 302 Gene3D - 25 286 IPR036457 -
Pvu9g0877 302 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Pvu9g0877 302 SMART PP2C_SIG_2 45 280 IPR001932 -
Pvu9g0877 302 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Pvu9g0877 302 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 291 - -
Pvu9g0877 302 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Pvu9g0877 302 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Pvu9g0877 302 PANTHER ALPHABET, ISOFORM E-RELATED 3 291 - -
Pvu9g0877 302 MobiDBLite consensus disorder prediction 1 27 - -
Pvu9g0877 302 CDD PP2Cc 33 280 IPR001932 -
Pvu9g0877 302 Coils Coil 243 267 - -
Pvu9g0877 302 SMART PP2C_4 24 278 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0877 Pvu-Chr9 13490293 13493356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0877 1 291 PP2C-type Phosphatase Gene Family AT4G31750 85.324 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0877 K17506 - vra:106761292 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0877 9 13490293 13493356 Pvu9g0877 9 13490293 13493356 ECH