Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0867 ATGGACATGGACATGGAGAAGCATGCCGTGTGTGGTGGTGCCAGTGATTCGACGAGTGAGCACAAGGTATACAAAGGGGTGAGAAAGAGAAAGTGGGGGAAATGGGTTTCTGAAATCAGACTTCCCAATAGCCGTGAACGCATATGGCTAGGGTCTTATGACTCTCCTGAAAAAGCAGCACGAGCCTTCGATGCTGCCCTTTTCTGTCTGCGTGGTCGCAATGCCAATTTCAACTTCCCCAACACTCCTTGCAGCATGGACACCAATGTGCCTCTGGCTGCTCCCCAATCTCTTACTCCACACGAGATTCAAGAGGTTGCTGCTAAGTTTGCAAACGAGGACCCATTACTACAAAAAAAACCTCTTACACAAGAATCTCAACGTGATGCTGCTGCTGCTGCTTCTGCTTCTGCTGCTGCTGATGGGAATTCTTCATCGTTTGGAGCGATGTTGTGTAAATCTGACAGCGTAGCAGGGAGTAGTTCTAGTACCACCAGCACCCCCACCACCACTGCCTCGTCATGTTCTACTACTATGCATGAATGTGATGGAACGGTGCTGGTGGGCCATGGGGACATGGATTGGACATTCTTGAAAGAGTTTGATTACTCCAACGAAGTTTTTCCCGTTGGATCCGACTATGATCTCTACTTTGAGCTACACAAGATGCACTCAACTTCAGGTGAGTTATTGTATTCCACTCCACCTCCTCCTCCACCTCCTTTTGACGGTTACCAAGAATTGATTGATGCTGAAGAAGATCCCTTTTATCACCAATCATTCCTTTGGAATTGGAACTTTTGA 804 0.4751 MDMDMEKHAVCGGASDSTSEHKVYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSPEKAARAFDAALFCLRGRNANFNFPNTPCSMDTNVPLAAPQSLTPHEIQEVAAKFANEDPLLQKKPLTQESQRDAAAAASASAAADGNSSSFGAMLCKSDSVAGSSSSTTSTPTTTASSCSTTMHECDGTVLVGHGDMDWTFLKEFDYSNEVFPVGSDYDLYFELHKMHSTSGELLYSTPPPPPPPFDGYQELIDAEEDPFYHQSFLWNWNF* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0867 267 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Pvu9g0867 267 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 267 - -
Pvu9g0867 267 CDD AP2 24 82 IPR001471 GO:0003700|GO:0006355
Pvu9g0867 267 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Pvu9g0867 267 Gene3D AP2/ERF domain 23 81 IPR036955 GO:0003700|GO:0006355
Pvu9g0867 267 SUPERFAMILY DNA-binding domain 23 80 IPR016177 GO:0003677
Pvu9g0867 267 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Pvu9g0867 267 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Pvu9g0867 267 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Pvu9g0867 267 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 11 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0867 Pvu-Chr9 13327339 13328429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0867 17 112 AP2-EREBP Transcription Factor Family AT1G74930 71.875 5.61e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu9g0867 AP2 2.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0867 - - vra:106760431 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0867 9 13327339 13328429 Pvu9g0867 9 13327339 13328429 ECH