Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0855 ATGGCATCCCAATTCAGGAAGAGGTCTAGAAGTCAAGGAATCTTTCTAAGGGTTTTTTTTTCTCTATGGGTAGTTAGGACTTGGGAGAATGAATCAGAGAAACAGGTTTTGAAACAAGGTTCTTTCCAAAGATTATGCCTCTCTGATATAAGCATTCCTAGCTCCCCTCAGGCCATTGAAGATCTTTCAATTTCACTGGTTGGCCCAAAGCTTTACACATTCACCCTAGAGGAGCTAAGGGAAGCAACACATAATTTCTCATGGAGTAATCTTCTTGGTGAAGGAGGGTTCGGACCTGTGTACAAAGGTTTTGTTGATAACAAACTTAGACCTGATTTGAAGGCTCAGTCTGTAGCTGTGAAACAACTGAACTTGGATGGCTTCCAAGGTCACAGAGAGTGGTTGGCGGAGATTATATTTCTTGGACAGCTGAGGCATCCACATCTTGTTAAGTTAATTGGCTACTGTTGTGAGGAGGAGCACAGGCTTCTTGTGTATGAATACATGGCCAGAGGCAGCTTGGAGAATCAACTATTCAGAAGGTACTCTGCTGCCTTGCCATGGTCAACCAGGATGAAGATTGCATTAGGTGCTGCTAAGGGTCTGGCCTTCCTTCATGAAGCAGATAAACCTGTAATATACAGAGATTTCAAAACTTCAAATATCTTACTAGACTCGGATTACACAGCTAAATTATCTGATCTTGGGTTAGCAAAAGATGGTCCTGAAGGGGAAGACACACATCTAACCACAACATGCATAATGGGAACCCGAGGCTATGCTGCTCCTGAGTACATTATGTCAGGTCACCTTTCCACCAAGAGTGATGTCTATAGCTATGGAGTGGTTTTGTTGGAATTGCTTACAGGAAGAAGAGTAGTGGATAAGTGCCGACCCAACAGAGAACGAAGCCTTGTGGAATGGGCAAGGCCTCTTTTGAGGGACCAAAGAAAGCTGCACCATATAATAGACTCTAGATTGGAAGGGCAGTTTCCTACGAAAGGGGCTTTGAAGGTTGCTGCATTGACCTATAAATGTTTGAGCCACCACCCCTATCCAAGGCCAACTATGGGTGATGTGGTTAAGATATTAGAGTCTGTTCAGGATTTTGACGATGTAATCAGAGGACCATTTGTGTATGTAGCGGTGAGTGAAAGTAGCCAATGA 1167 0.4362 MASQFRKRSRSQGIFLRVFFSLWVVRTWENESEKQVLKQGSFQRLCLSDISIPSSPQAIEDLSISLVGPKLYTFTLEELREATHNFSWSNLLGEGGFGPVYKGFVDNKLRPDLKAQSVAVKQLNLDGFQGHREWLAEIIFLGQLRHPHLVKLIGYCCEEEHRLLVYEYMARGSLENQLFRRYSAALPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDLGLAKDGPEGEDTHLTTTCIMGTRGYAAPEYIMSGHLSTKSDVYSYGVVLLELLTGRRVVDKCRPNRERSLVEWARPLLRDQRKLHHIIDSRLEGQFPTKGALKVAALTYKCLSHHPYPRPTMGDVVKILESVQDFDDVIRGPFVYVAVSESSQ* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0855 388 Gene3D Phosphorylase Kinase; domain 1 51 168 - -
Pvu9g0855 388 PANTHER OS01G0588500 PROTEIN-RELATED 25 386 - -
Pvu9g0855 388 PANTHER KINASE 1B 25 386 - -
Pvu9g0855 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Pvu9g0855 388 Gene3D Transferase(Phosphotransferase) domain 1 169 375 - -
Pvu9g0855 388 ProSiteProfiles Protein kinase domain profile. 86 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0855 388 Pfam Protein tyrosine and serine/threonine kinase 89 364 IPR001245 GO:0004672|GO:0006468
Pvu9g0855 388 CDD STKc_IRAK 92 365 - -
Pvu9g0855 388 SUPERFAMILY Protein kinase-like (PK-like) 62 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0855 Pvu-Chr9 13216402 13218937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0855 73 364 Glycoside Hydrolase AT3G07070 51.186 8.66e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu9g0855 PK_Tyr_Ser-Thr 6.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0855 - - gmx:100813130 657.521