Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0847 ATGGCATTTTGGATTGGACTCCTTCTGGTTCTTCTCCTTTGTTTGGATTCGGTGAATTCTCAAGACGGAGCAACGTTGTGGGAGATGAAGAAGTCGTTGAGGGATGTGGATAACGTTCTGTTTGACTGGACTGACACACCTTCTTCAGATTATTGTCTCTGGAGAGGGGTTACGTGTGATAATGTCACTTACAATGTGGTTGCACTGAATCTTTCAGGATTGAATCTTGAGGGCGAAATTTCACCTGCATTAGGGAGGCTTAGCAGCTTGGTCTCTATCGATCTCAAGGAAAACCGTTTATCTGGCCAGATACCTGATGAACTTGGCGACTGTTCCTCTCTGAAAAACGTAGACTTGTCTTTCAATGAGATTCGGGGAGATATACCGTTTTCAATTTCAAAGATGAAACAACTGGAAAATCTAATCTTGAAAAATAATCAGCTAATTGGACCAATTCCTTCAACTCTCTCTCAGGTTCCTAACTTGAAGATTCTAGACCTCGCACAGAATAATCTCAGTGGGGAGATACCAAGACTTATATACTGGAATGAAGTTTTGCAATATCTTGGCTTGCGAGGTAACAATTTGATGGGTTCACTTTCTCCAGACATATGCCAGTTAACTGGGCTGTGGTATTTTGACGTGAGAAACAATAGCTTGACAGGCAGTATTCCCGAAAACATAGGCAATTGTACTGCTTTCCAGGTCTTGGATTTATCCTACAACAAGCTATCTGGAGAGATACCATTCAATATTGGTTTCCTGCAAGTAGCAACTCTGTCATTGCAAGGCAATAAGCTCTCAGGTCATATCCCATCTGTTATTGGTCTGATGCAAGCCCTTGCTGTCTTAGATTTGAGTTGTAACTTGCTAAGTGGGCCAATCCCTCATATATTGGGAAATTTGACCTACACAGAAAAATTGTATTTGCATGGAAACAAGCTGACTGGTCTCATCCCCCCAGAGCTCGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGATAACCATTTAAGTGGACATATCCCGCCTGAGCTTGGAAAGCTTACTGATCTGTTTGACTTAAATGTTGCCAATAACAACCTAGAGGGTCCAATTCCTAGTAATCTTAGCTCATGTAAAAACCTGAACAGCCTCAATGTGCATGGGAATAAGCTGAGTGGAACAATTCCCTCATCTTTACAAAGCTTGGAGAGTATGACCTATCTGAATCTTTCTTCAAACAATCTTCAAGGGTCAATTCCAATTGAACTTTCACGGATCGGAAATTTGGATACACTGGATATATCAAAGAATAATATAGTTGGTTCCATTCCTTCTTCCATTGGTGATTTGGAACATCTTCTGAAGTTGAACCTGAGCAGAAATCATTTAACAGGCTTTATTCCGGCAGAATTTGGTAATCTGAGAAGTGTCATGGATATTGATCTTTCAAATAATCAACTCTCTGGCTTGATCCCTGAAGAACTTAGTCAGCTTCAGAACATGATATATTTGAGACTAGAAAAGAACAAATTATCCGGGGATGTGTCTTCGCTTGTAAATTGCCTTAGTCTTTCTTTGATTAATGTATCTTACAACAATTTAGTTGGTGTTATTCCCACAAGCAACAATTTTTCCAGGTTTTCCCCTGATAGTTTCATTGGAAACCCTGTTAACTTGTCTAAGGCAGCTATCCTAGGAATTGCTCTAGGTACCCTTGTGATTCTGTTCATGGTACTCTTTGCAGCTTGCAGACCACACAATCCAGCCCCTTTCCCTGACGGATCTTTTGACAAACCAGTTAATTACTCACCTCCCAAACTAGTGATTCTTCACATGAATATGGCACTTCATGTATATGATGATATAATGAGGATCACTGAAAACCTAAGTGAGAAGTATATAATTGGGTATGGTGCATCAAGTACAGTTTACAAATGTATTCTCAAGAATTGCAATCCAGTGGCTATCAAGAAGCTATATTCCCACTACCCCCAATGCTTGAAAGAGTTTGAGACTGAGCTTGAGACAGTTGGCAGCATTAGGCACAGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCTCCATTTGGAAACCTCCTCATTTATGATTACATGGAAAATGGCAGTCTGTGGGATCTTCTACATGGACCTTCCAAGAGGAAAAGGCTTGATTGGGATGTTCGTCTTAAAATAGCTCTTGGATCAGCCCAAGGGCTAGCTTATCTACACCATGATTGCTGTCCACGTATCATTCACAGGGATGTGAAATCATCTAATATATTACTAGATAAAGACTTTGAGCCCCATCTCACCGATTTTGGCATTGCAAAGAGTCTATGCCCCTCTAAATCCCACACTTCAACTTACATAATGGGCACAATTGGCTACATAGACCCTGAGTATGCTAGAACTTCTCGACTCACTGAGAAATCTGATGTGTATAGCTACGGTATTGTATTACTTGAGCTGCTAACTGGGAGGAAAGCTGTGGAAAACGAATCAAACCTTCATCATCTGATTTTGTCCAAGACAGCTAGTGATGCTGTAATGGAAACCGTTGATCCAGATATTAGTGCCACATGCAAGGAAATGATAGCAGTAAAAAAAGTTTTTCAGCTTGCTCTTTTGTGCACCAAGAAGCAACCAGTGGATAGACCCACAATGCACGAGGTGACGCGTGTGCTTGGAAGTTTAGTGCCACCAAAAGAATCAGTCCCAACAATGCAAGTACTCATACCTCCTTCACGGCCATCTGCTAAAACGCAATCCTACAAGGACGAATATGCCAATCTCAAAGCTCCACACTTGGTCAACTGTCCCTCCATCAGCACCTCTGATGCCCAACTCTTCCTCAAATTTGGAGAAGTAATATCTCAAAACAGCGTGTGA 2877 0.4119 MAFWIGLLLVLLLCLDSVNSQDGATLWEMKKSLRDVDNVLFDWTDTPSSDYCLWRGVTCDNVTYNVVALNLSGLNLEGEISPALGRLSSLVSIDLKENRLSGQIPDELGDCSSLKNVDLSFNEIRGDIPFSISKMKQLENLILKNNQLIGPIPSTLSQVPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLMGSLSPDICQLTGLWYFDVRNNSLTGSIPENIGNCTAFQVLDLSYNKLSGEIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNLLSGPIPHILGNLTYTEKLYLHGNKLTGLIPPELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGPIPSNLSSCKNLNSLNVHGNKLSGTIPSSLQSLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISKNNIVGSIPSSIGDLEHLLKLNLSRNHLTGFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMIYLRLEKNKLSGDVSSLVNCLSLSLINVSYNNLVGVIPTSNNFSRFSPDSFIGNPVNLSKAAILGIALGTLVILFMVLFAACRPHNPAPFPDGSFDKPVNYSPPKLVILHMNMALHVYDDIMRITENLSEKYIIGYGASSTVYKCILKNCNPVAIKKLYSHYPQCLKEFETELETVGSIRHRNLVSLQGYSLSPFGNLLIYDYMENGSLWDLLHGPSKRKRLDWDVRLKIALGSAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEPHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVENESNLHHLILSKTASDAVMETVDPDISATCKEMIAVKKVFQLALLCTKKQPVDRPTMHEVTRVLGSLVPPKESVPTMQVLIPPSRPSAKTQSYKDEYANLKAPHLVNCPSISTSDAQLFLKFGEVISQNSV* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0847 958 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Pvu9g0847 958 Pfam Leucine rich repeat N-terminal domain 20 60 IPR013210 -
Pvu9g0847 958 ProSiteProfiles Protein kinase domain profile. 625 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0847 958 SUPERFAMILY Protein kinase-like (PK-like) 602 891 IPR011009 -
Pvu9g0847 958 Gene3D Phosphorylase Kinase; domain 1 599 700 - -
Pvu9g0847 958 SUPERFAMILY RNI-like 200 533 - -
Pvu9g0847 958 SMART serkin_6 625 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0847 958 ProSitePatterns Protein kinases ATP-binding region signature. 631 654 IPR017441 GO:0005524
Pvu9g0847 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 746 758 IPR008271 GO:0004672|GO:0006468
Pvu9g0847 958 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 945 - -
Pvu9g0847 958 Gene3D Transferase(Phosphotransferase) domain 1 701 902 - -
Pvu9g0847 958 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 7 945 - -
Pvu9g0847 958 SMART LRR_typ_2 326 350 IPR003591 -
Pvu9g0847 958 SMART LRR_typ_2 87 111 IPR003591 -
Pvu9g0847 958 SMART LRR_typ_2 470 493 IPR003591 -
Pvu9g0847 958 SMART LRR_typ_2 159 183 IPR003591 -
Pvu9g0847 958 SMART LRR_typ_2 207 231 IPR003591 -
Pvu9g0847 958 SMART LRR_typ_2 446 469 IPR003591 -
Pvu9g0847 958 SMART LRR_typ_2 398 422 IPR003591 -
Pvu9g0847 958 SUPERFAMILY L domain-like 22 255 - -
Pvu9g0847 958 Gene3D Ribonuclease Inhibitor 184 293 IPR032675 -
Pvu9g0847 958 Gene3D Ribonuclease Inhibitor 19 183 IPR032675 -
Pvu9g0847 958 Gene3D Ribonuclease Inhibitor 294 558 IPR032675 -
Pvu9g0847 958 Pfam Protein kinase domain 628 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0847 958 Pfam Leucine rich repeat 280 339 IPR001611 GO:0005515
Pvu9g0847 958 Pfam Leucine rich repeat 424 483 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0847 Pvu-Chr9 13145288 13152201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0847 89 958 Receptor kinase-like Gene Family AT5G07180 62.992 0.0 1106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pvu9g0847 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0847 K20718 - gmx:100804875 1692.17