Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0835 ATGGATGCCAATTATGACAAGCAAGGTCTGCAAGGCGGCGAAGTGAGCATGGCTGAGAAGAAAAGGGAAGTGATGGTGGCGATTCCAAATGAGGGTGGTGGTGAATCTTTGATGGCGCAGAGAATGTTAAACGACAACGAGGTTGCTGCAAAGTCGCCACCTTTGAACTGTGCTTCCCCTGAGATAAGGTTCATGCCAAGCCCAAACAAGCCCCCAAAGGTTCCCGCTTCCAACGCCAATCTCACTCGGAGAAAATCACTCACAAGGTCAGTGTATTCCAAACCCAAATCAAGGTTTGGTGAACAGCCTTACCCTGTTGATGGTACCCTTTTGGAAGAGAATGGTACCTCAACTTTGCAAGAAAATATGAGTGTTGGTTCACCATATAAAGCATCGCCTATTAACAATAAACCTGGAACTGTTAATAGAACAGTCTCCATCCTTTCTGTGATCACTCCCAAGACGCCGTTGATGGCGTCTCCCGGGCCGGCTGGCGGGGAGGATTTCGATGAAATCATTTACAGAAAAGTTGAATTGAGTAAAAGCAAACGCAGTAGGAGAGTGACAGCTAAGGTTTTGTTTGAATGGTTTGTTTTTGTGTGCATTACAAGTAGCTTGGTGGCTAGTTTAACAGTTGAAAAACTTAGAAGGACGGAGATTTGGGGTTTGGGGATTTGGAGGTGGTGTGTGCTTGTGTTGGCGACCTTTTGTGGCATGTTGGTTACCAGATGGTTCATGCGCATTATTGTTTTCTTGATTGAGACCAACTTTTTGTTGAGGAAAAAGGTGCTGTATTTTGTCCATGGACTGAAGAAGTGTGTCCAGTTCTTCATTTGGCTTGGTTTGGTTCTTCTTACATGGGTTCTGTTGATTAACCGGGGGGTGCACCGATCTGAATTGGCCACAAAGATTTTGAATGGAGTAACATGGACTCTTGTTTCCCTCCTCATTGGAGCATTCCTGTGGTTCGTGAAGACATTGTTGCTGAAGATTTTGGCGTCAAATTTTCATGTTAAATCTTTCTTTGATCGAATTCAAGAATCGCTATTCCATCAGTACATTCTGCAGACTCTTTCTGGGCCTCCACTTGTAGAAGAGGCTGAGAAGGTTGGGGCATCCCTCAGTGTTGGTCACTTTAGTTTCAGGAGTACTGATGGTAAGGGTGGAATGAAGAAAGAGACTATTGATATTGCGAAGCTTCACCAGATGAAACAAGAGAAGGTTTCTGCGTGGACCATGAAGGTCTTGGTAGATGCAATGACAAATTCAGGGCTGTCCACAATCTCTGGTGCACTAGATGAAAGTTTTGATGATGGAGAAAATGAACAGACTGATAAAGAGATTACTAATGAGATGGAAGCAATTGCTGCAGCCTATTACATTTTCAGAAATGTTGCTGCCCATGGTTGCACGTACATTGATGAGGATGAACTACGGAGGTTCATGATTAAGGAAGAAGTGCGGATGGTATATCCCTTACTGGCTGAAGCAGAAACGGGACAGATTACCAGGAAGTCCTTAACAGATTGGTTGTTGAAGGTATATCAGGAACGCAAATCATTGGCACATGCCTTAAGCGACACCAAAACTGCTGTGATACAACTAAACAAGCTCGTGACAGTAATCCTAATAGTGGTAAACATAATTGTGTGGCTTCTACTAATGGAGATTGCAACAACAAAAGTACTTGTATTTCTCTCTTCCCAGCTAGTACTTGCAGCTTTCATGTTTGGAAACACTTGTAAGAACATATTTGAAGCTATCATCTTCGTGTTTGTGATGCATCCATTCGATGTTGGTGATCGATGTGTTATTGATGGGGTTGAGCTATTGGTTGAAGAAATGAATATACTGACCACAGTCTTCTTGAAGCTTAACAATGAAAAAGTGTACTATCCAAATTCTGTATTGGCCATGAAACCGATTAGCAATTATTACAGAAGCCCAGATATGGGCGACCGTGTAGAGTTCTCAATTGATTTTACAACACCAGCTGAGAAAATTGGGGCACTCAGAGAAAAAGTAAAGTGGTACCTGGAGAGAAATCCCCAATACTGGCACCCTAATCATGGCTTAGTAGTGAAGGACATTGAAGACGTAAACAAGATTAAGATGGGTATATACGTTACCCACACAATGAACTTTCAAGAGTTTGGGGAGAAAAACAGGAGAAGAACTGAACTGGTGATGGAAATAAAGAAAATATTTGAAGAACTCAACATCAGATACAACCTTCTTCCACAAGGAATTCATCTCAAACGTATGGAGCCAGACCCTAGGGTGCTCAATACATGA 2295 0.4261 MDANYDKQGLQGGEVSMAEKKREVMVAIPNEGGGESLMAQRMLNDNEVAAKSPPLNCASPEIRFMPSPNKPPKVPASNANLTRRKSLTRSVYSKPKSRFGEQPYPVDGTLLEENGTSTLQENMSVGSPYKASPINNKPGTVNRTVSILSVITPKTPLMASPGPAGGEDFDEIIYRKVELSKSKRSRRVTAKVLFEWFVFVCITSSLVASLTVEKLRRTEIWGLGIWRWCVLVLATFCGMLVTRWFMRIIVFLIETNFLLRKKVLYFVHGLKKCVQFFIWLGLVLLTWVLLINRGVHRSELATKILNGVTWTLVSLLIGAFLWFVKTLLLKILASNFHVKSFFDRIQESLFHQYILQTLSGPPLVEEAEKVGASLSVGHFSFRSTDGKGGMKKETIDIAKLHQMKQEKVSAWTMKVLVDAMTNSGLSTISGALDESFDDGENEQTDKEITNEMEAIAAAYYIFRNVAAHGCTYIDEDELRRFMIKEEVRMVYPLLAEAETGQITRKSLTDWLLKVYQERKSLAHALSDTKTAVIQLNKLVTVILIVVNIIVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLAMKPISNYYRSPDMGDRVEFSIDFTTPAEKIGALREKVKWYLERNPQYWHPNHGLVVKDIEDVNKIKMGIYVTHTMNFQEFGEKNRRRTELVMEIKKIFEELNIRYNLLPQGIHLKRMEPDPRVLNT* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0835 764 SUPERFAMILY Sm-like ribonucleoproteins 586 645 IPR010920 -
Pvu9g0835 764 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 48 753 - -
Pvu9g0835 764 Pfam Mechanosensitive ion channel 536 742 IPR006685 GO:0016020|GO:0055085
Pvu9g0835 764 PIRSF Memb_At2g17000 28 763 IPR016688 -
Pvu9g0835 764 MobiDBLite consensus disorder prediction 88 107 - -
Pvu9g0835 764 Gene3D - 596 645 IPR023408 -
Pvu9g0835 764 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 48 753 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0835 Pvu-Chr9 13015034 13018890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0835 50 754 Mechanosensitive Ion Channel Family AT5G12080 58.956 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0835 K22048 - gmx:100803107 1328.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0835 9 13015034 13018890 Pvu9g0835 9 13015034 13018890 ECH