Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0830 ATGGATAACAATTGGAATAACTCCTCCGACTTATTTGACAACAGTCCACTTATTAGTAACTATATCGAACCAGACCCCGCACTTGTCTATATATTCAATGACCAACCCAATGTACTGCCGCAGCAACGAAATGCAGAACAAAATGATCCTTTTGTGGTTGAACAGGATCATGTTTCCTTCACTGGTTTAACCATTGAAGATGTATCCACTCATAGCGATAATGATATCACCACAGGAGGAGTTTCTAAATTGGATCAGGGGGGTTGGTCGATGAGAAAGCGTAAATTTTCCTTCATGGATTCAATGATTGAAGATCATCCCATGCATGACAAAGATAATTTTCCCAACGGAGAAAATATGAGTGCACACATAAATCTAAACCAACTTCGAGTTTGGCCTCCCGCACCATTTGATATTGATATTGACACTTCCTTTGACCCGTTTCTTCATAACTTGATCGACCGGGACATCTCAATTTTCGATCTATCCAATGATGAACTCGTTTCACCCTCCTTGCAACAAAATGCATTGCCCCAACACCAACAGCAAGTGCCACAAAATGCACTTTCCAAACAACAAAATGCGCTGCCCCAACTCCTGCATACACTGCCCCAAAGCCAAAATGTTTATCAATTTGGCGTTGAACAGATTCATGTTCCCATCCTGAATCCAACGTTCCAAGAACAATCCTTGCATGTGAATTGTAATTTTACCACAGGAGGAGAAGTTCCCAACATCGACGTGGGTAACCAATCCATGGCTGAACATCCATTGTTAAGGCATGGTATACTGAACGAGGAAGACGTGATCGCAATTGATCATTGGCCCTCGTCATCAAAGTTACTATCTTGCTCTTGCTGTCAAATTCTTAGACAAATAATTCACACAGATGGTTTTAAGTTTGAAAAGCTAGAGATTCATGGATCGCTCGGGGTGATTGGCCACGCGATATTCCACATTCAGGATATGACACCAGGGGGTGAACCTCCAAGAGAAATTTATCAAATGATAGATTTGTGCGGCAAAAGCATAGAACAAATAAGGAGTTTCCTGGCAGCGTACTGCAAGGATCAGACAAGATTAGGGCTCGTTACTCTTGATGATCCGTTGTCTTCGTATTATGATACCATCTGCACTGGACTTGATTGGGTTGAACATTATAATGACGGAGACGATGACTTGAGTCCACCTAATAGCACAGAGCCTGAGTCTGATTCTGAGCCCGAACCCGAGCCCGAGCCCGAGCCTGAGCCTGAGACTATTCCTGAGTCTGATCCTGTTCCTGAGCCTCATAATGGAGAGGCTTCAACTACTAAGCCTAAGCCTAAACGTAATATGGCAGTTCAGAGGAAGAGAGTACCAAAGATGACAATGAATGATTTGAGCCCTTTCTTCCATTTAACTATTAGGGATGCAGCGGATAAACTGGATGTAAGCGACTCTGTGGTGAAGAAAATCAGCCGCTTGGGAAACTTGAAAAGGTGGCCCCAAAGAAAGCTGCAAAGCCTTGCGAAGGATGTGAGAGTTCTGAGAAAAGCACTGAATTCACCCTATGAAGGGACAAGCAAGAGAGTTCGACAAGAAATTCAAAGACTCCAGCGAGAAATGGTTGCAGTTTGTGGTGGAGTTGCCCCAACCGGAATAGAAATGCTCCAATTGGAAGAAGAATAG 1671 0.4339 MDNNWNNSSDLFDNSPLISNYIEPDPALVYIFNDQPNVLPQQRNAEQNDPFVVEQDHVSFTGLTIEDVSTHSDNDITTGGVSKLDQGGWSMRKRKFSFMDSMIEDHPMHDKDNFPNGENMSAHINLNQLRVWPPAPFDIDIDTSFDPFLHNLIDRDISIFDLSNDELVSPSLQQNALPQHQQQVPQNALSKQQNALPQLLHTLPQSQNVYQFGVEQIHVPILNPTFQEQSLHVNCNFTTGGEVPNIDVGNQSMAEHPLLRHGILNEEDVIAIDHWPSSSKLLSCSCCQILRQIIHTDGFKFEKLEIHGSLGVIGHAIFHIQDMTPGGEPPREIYQMIDLCGKSIEQIRSFLAAYCKDQTRLGLVTLDDPLSSYYDTICTGLDWVEHYNDGDDDLSPPNSTEPESDSEPEPEPEPEPEPETIPESDPVPEPHNGEASTTKPKPKRNMAVQRKRVPKMTMNDLSPFFHLTIRDAADKLDVSDSVVKKISRLGNLKRWPQRKLQSLAKDVRVLRKALNSPYEGTSKRVRQEIQRLQREMVAVCGGVAPTGIEMLQLEEE* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0830 556 MobiDBLite consensus disorder prediction 404 422 - -
Pvu9g0830 556 ProSiteProfiles RWP-RK domain profile. 443 524 IPR003035 -
Pvu9g0830 556 PANTHER PROTEIN RKD4 154 542 IPR044607 GO:0003700
Pvu9g0830 556 PANTHER RWP-RK DOMAIN PROTEIN 154 542 - -
Pvu9g0830 556 MobiDBLite consensus disorder prediction 388 455 - -
Pvu9g0830 556 Pfam RWP-RK domain 455 503 IPR003035 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0830 386 503 AtRKD Transcription Factor Family AT4G35590 30.894 2.04e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pvu9g0830 RWP-RK 3.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0830 - - pvu:PHAVU_009G080800g 1083.94