Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0825 ATGAGTTTGGGCACGGCGGAGGACGATCCGGGTTCTGAAATCCACATCCCGGCGGAGATTGACTGGCACATGTTGGATAAGTCCAAGTTTTTCTACCTCGGCGCCGCCTTATTCTCCGGCGTTTCCTTCACGCTCTACCCCATGGTCGTGTTGAAGACGCGCCAGCAGGTCTCCTCCGCGCGCTTCTCCTGCCTCAACATGTCCTGCGCCATTATGCGCTACGAGGGTCTCAGAGGCTTCTACAAAGGCTTCGGCACTTCCCTCATGGGCACCGTCCCCGCGCGGGCGCTCTACATGGCCTCGCTTGAAGTCACAAAAAGTAACGTCGGGACTGCCTTTCTCGAATTGGGGTTCTCCGAGACGACGGCTGTGGCGGTGGCTAATGCCGCCGCGGGTGTCACTTCCGCCATGGCGGCGCAGCTGGTGTGGACTCCCGTGGATGTCGTCAGTCAACGGCTCATGGTTCAGGGGAGCGCAGGGAGTAAAAACATTCTGGCTAATCATAATTACGAGAGTTACAGAAACGGGTTTGATGCCTTTAGGAAGATTCTGTGTGCTGATGGAGCAAGAGGGTTCTACAGAGGGTTTGGGATTTCGATATTGACATATGCTCCTTCCAATGCGGTTTGGTGGACTTCTTATTCCATGGTTCACAGACTCATTTGGGGTGCTTTTGGTTCCTACATGAGTAAGGGTAAAACTGAAAGCAGTGATAATTTGAGTGGTTTCAGGCCTAATTCAAAGACAGTAGTGGCGGTTCAAGGGTTAAGTGCGGTTATGGCTAGTGGGGTATCTGCAATTGTGACAATGCCTCTTGATACCATTAAGACAAGGTTGCAGGTGTTGGACAGTGAAGAGCATGGGAGAAGAAGGCCTCTAACTTTTGTTCAGACGGTGAGGAATTTGGTGAAGGAAGGTGGATTGCCTGCATGTTACAGAGGATTGGGACCAAGATGGGCTTCCATGTCATTATCTGCTACAACTATGATTACTACTTACGAGTTTTTGAAAAGAATGTCTACCAAGAGTCCATAG 1035 0.5111 MSLGTAEDDPGSEIHIPAEIDWHMLDKSKFFYLGAALFSGVSFTLYPMVVLKTRQQVSSARFSCLNMSCAIMRYEGLRGFYKGFGTSLMGTVPARALYMASLEVTKSNVGTAFLELGFSETTAVAVANAAAGVTSAMAAQLVWTPVDVVSQRLMVQGSAGSKNILANHNYESYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYMSKGKTESSDNLSGFRPNSKTVVAVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDSEEHGRRRPLTFVQTVRNLVKEGGLPACYRGLGPRWASMSLSATTMITTYEFLKRMSTKSP* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0825 344 Gene3D Mitochondrial carrier domain 28 343 IPR023395 -
Pvu9g0825 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Pvu9g0825 344 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
Pvu9g0825 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 343 - -
Pvu9g0825 344 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Pvu9g0825 344 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Pvu9g0825 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Pvu9g0825 344 Pfam Mitochondrial carrier protein 252 342 IPR018108 -
Pvu9g0825 344 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Pvu9g0825 344 Pfam Mitochondrial carrier protein 40 108 IPR018108 -
Pvu9g0825 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 343 - -
Pvu9g0825 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0825 Pvu-Chr9 12929312 12930346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0825 1 343 Chloroplast and Mitochondria Gene Families AT1G72820 66.185 2.96e-163 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0825 K15121 - gmx:100784202 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0825 9 12929312 12930346 Pvu9g0825 9 12929312 12930346 ECH
Pvu9g0825 9 12929312 12930346 Pvu1g0403 1 4057316 4061042 ECH