Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0822 ATGAGTGATAATAATCCAAAACCACCGGATTCACCTGAGAGTGATTTCAGCAAGCAATGGCCTTCGGAGCTCTATGAGTACCTGAATTTAGATGATGATCAATTGGCATGTGATGAGCTCGATTCGTTTGTTTCAGGGCATGTTCTCAGCCCTAACACTGATCAAGCCAATGAAGTCGGTGACCTTGTAGGAAGTAGCAGCCACCATGAAGAGTTTTCTACCAACGTAGATGAGAAGAAAGAAGTGAGAGATAGAGTTGCGTTCAAAACAAAGTCAGAGATAGAAATAATGGATGACGGGTTCAAGTGGAGGAAGTACGGAAAGAAGAAGGTGAAAAACAGCCCCAATCCAAGGAACTACTACAAGTGTTCAGTAGACGGTTGTTCAGTAAAAAAGACAGTTGAAAGGGAGAAGGATGATCCGAGGTACGTAATAACAACCTACGTAGGCACCCATACTCATCCGAGTAACAGTTAA 477 0.4298 MSDNNPKPPDSPESDFSKQWPSELYEYLNLDDDQLACDELDSFVSGHVLSPNTDQANEVGDLVGSSSHHEEFSTNVDEKKEVRDRVAFKTKSEIEIMDDGFKWRKYGKKKVKNSPNPRNYYKCSVDGCSVKKTVEREKDDPRYVITTYVGTHTHPSNS* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0822 158 SUPERFAMILY WRKY DNA-binding domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g0822 158 Pfam WRKY DNA -binding domain 98 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0822 158 Gene3D WRKY domain 84 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g0822 158 ProSiteProfiles WRKY domain profile. 92 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0822 158 SMART WRKY_cls 97 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0822 158 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 156 IPR044810 GO:0003700
Pvu9g0822 158 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 41 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0822 Pvu-Chr9 12910792 12911776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0822 24 156 WRKY Transcription Factor Family AT5G26170 51.634 6.25e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g0822 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0822 - - gmx:100819462 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0822 9 12910792 12911776 Pvu9g0822 9 12910792 12911776 ECH