Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0818 ATGGAGGAGATGTCAACCACGGTTGCAGTGCCATTTAGAGTAGGTAATTCAGTGTGTGATAAGCCAACCATTACAACCCACATGGATGTGTCCAGAATTAAGCTGATGACAGATGCAGGGTTGTTATCCAATTCTATAACTAAGGTCTCTACTGATACTTTTATTGGAGATGAGGATCATGACTGTGATTGTCTTGGGGAGGAAGTTGGTACTGCAGCAGTCACACCTCCTGAACAGGGAAGAAAAGAAGAAATTCCGATGTTGGGTACGGTGTCCCAAAATATAAACTCTTTGGTTGTCGGTGAAGAAGTTTTAACCCCAGAAATTGAGGATGATGATTTGATATCGCTGGAAGGTGATCCAATTATTGATAGTTCTCTTTCAGTAGCCAGTGAGAATATTAGTTTTTGTGGAGATGAGTTCATCGGTTCTGAGGTTTCTGCAGATTTAGGGACAAGAAGTTCCATAGACATAGAGAAAAGCACTGCCAGGGCTACTGATTTGGGTGTGTCAAATGTAGTGGCAGATGTAGCAGTTAGCCTTGAAGAAGAGACAGGAGTTAGATCTGGCCCAAAGCCTACGACAGGTGCTCTTCATCAACCAACTCTGGAAAGATCTGTGAGTGGAACAGTTGGTAGAAGTGTTTTTGAATTAGATTGTAACCCACTTTGGGGATTTACATCTGTGTGTGGAAAAAGACCTGAGATGGAAGATGCACTTGCAGCTGTACCTCGATTTTTGAAAATTCCTATTCAAATGCTAACTGGTGATAGGGTACCTGATGGAATAGACAAATGTTTCAGGGAGCAGACACTACATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGCAGCGAGCGCATGCATTTTGCCTTGGCTGAGGAAATAGAATCTATCAAGGAAGGTCTATTAGTTGAAAGCACCAAGGATGATTGTCAAGATCTGTGGAAAAAAGCCTTCACTGGTTGCTTTTTGAAGGTTGATTCTGAAGTTGGGGGGGAAGTTAATTCTGATCCTGTTGCCCCAGAAACTGTTGGATCCACTGCTGTTGTTGCTGTTATATGTTCATCTCATATTGTAGTCTCAAACTGTGGTGATTCAAGAGCAGTTCTGTGTCGTGGCAAAGAACCCATGGCCCTATCTGTTGACCACAAACCAAATCGACCGGATGAATATGCAAGAATTGATGCAGCTGGAGGCAGGGTTATACAATGGAATGGTCACCGAGTTTTTGGTGTTCTCGCAATGTCAAGGTCTATTGGTGATAGGTATTTGAAGCCATGGATTATTCCAGACCCTGAGGTGAAGTTTGTTCCTCGTGCGAAAGACGATGAATGCCTCATTCTGGCAAGTGATGGCCTGTGGGATGTCATGACAAACGAAGAGGTGTGTGACATTGCACGGCGGCGGATACTTCTCTGGCACAAGAAAAATGGCTTGGCACTGCCCTCAGAAAGGGGAGATGGAATTGATCCTGCTGCACAAGCAGCTGCAGAGTACCTATCAAACCGTGCCCTTCAGAAAGGAAGCAAAGACAACATCACTGTGATTGTGGTGGATTTGAAAGCTCAAAGAAAAAAATTTAAGAGCAAAGAGATGACTGTTTCTTCAACTGCACCTGGGTGA 1644 0.4386 MEEMSTTVAVPFRVGNSVCDKPTITTHMDVSRIKLMTDAGLLSNSITKVSTDTFIGDEDHDCDCLGEEVGTAAVTPPEQGRKEEIPMLGTVSQNINSLVVGEEVLTPEIEDDDLISLEGDPIIDSSLSVASENISFCGDEFIGSEVSADLGTRSSIDIEKSTARATDLGVSNVVADVAVSLEEETGVRSGPKPTTGALHQPTLERSVSGTVGRSVFELDCNPLWGFTSVCGKRPEMEDALAAVPRFLKIPIQMLTGDRVPDGIDKCFREQTLHFFGVYDGHGGSQVANYCSERMHFALAEEIESIKEGLLVESTKDDCQDLWKKAFTGCFLKVDSEVGGEVNSDPVAPETVGSTAVVAVICSSHIVVSNCGDSRAVLCRGKEPMALSVDHKPNRPDEYARIDAAGGRVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVKFVPRAKDDECLILASDGLWDVMTNEEVCDIARRRILLWHKKNGLALPSERGDGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKKFKSKEMTVSSTAPG* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0818 547 Pfam Protein phosphatase 2C 253 520 IPR001932 -
Pvu9g0818 547 SMART PP2C_4 213 525 IPR001932 -
Pvu9g0818 547 MobiDBLite consensus disorder prediction 184 203 - -
Pvu9g0818 547 ProSiteProfiles PPM-type phosphatase domain profile. 223 527 IPR001932 -
Pvu9g0818 547 ProSitePatterns PPM-type phosphatase domain signature. 274 282 IPR000222 GO:0043169
Pvu9g0818 547 Gene3D - 210 537 IPR036457 -
Pvu9g0818 547 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 142 537 - -
Pvu9g0818 547 CDD PP2Cc 225 527 IPR001932 -
Pvu9g0818 547 PANTHER ALPHABET, ISOFORM E-RELATED 142 537 - -
Pvu9g0818 547 SUPERFAMILY PP2C-like 217 528 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0818 Pvu-Chr9 12874523 12879443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0818 1 537 PP2C-type Phosphatase Gene Family AT1G17550 48.022 2.26e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0818 K14497 - gmx:102662702 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0818 9 12874523 12879443 Pvu9g0818 9 12874523 12879443 ECH
Pvu9g0818 9 12874523 12879443 Pvu1g0442 1 4495045 4500430 ECH