Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0806 ATGGGTGCCTCAGGAAAATGGGTAAAGGCTTTAATCGGACTCAAGAAACCAGACAAAGACGAACATGTGAAAGAGGGTGGTAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGATATGGGTTCTTGGAAGGGTTTCAAAGGAAACCACCACAGAGAGGCTTCTGAAGGGTCTGATTCTCCACCTGTTTTAGCAGCAGATGCTTACACAGCTGCAGTAGCCACTGTGGTTCGAGCACCACCTAAGGATTTCAGACTCGTCAAGCAAGAATGGGCCGCTATAAGAATCCAAACTGCTTTCCGTGGCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGATTCAAGCTCTTGTGCGGGGTAGACAGGTGAGGAAGCAAGCTGCGGTGACACTGAGGTGTATGCAGGCCTTGGTTCGGGTTCAGGCCCGTGTAAGAGCTCGTCGTGTGAGGATGTCCATGGAGGGGCAAGCTGTGCAGAACATGCTTAATGAAAGGCGCACTAAGCTTGAACTTTTGAAGCAAGCTGAGCAATGCAGATCAGCCCAAAGTTACAATTCACGAACTACTAATGGCTCTTTTTGCTCCCTGAAGAGTCATGAGAGTAACAAAGCTAACTGGGGGTGGACTTGGTTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAACAATCTCAGGCTGAAGCCTTGTTAGATAAAACCCCACTTCCAAAGAAGTTTGAGGAACCCTTTGTGAACTCTAATTCCAAACCATGTTTGGTCAAGGTAAAGAAGAACAACATGACAACAAGGGTTTCTGCTAGGCCTCCCCTTGTTGGGCAAGCTACTCGTTCATCCTCAAGTCCAAGTTCTGAGTTTCGATATGATGAGAGCTCTGCATCATCTTCTATTTGTACATCTACAACACCGATATCTGGGAACACTTGTGACAGGACTGATGATAGTAACGGTAATGCTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGTTAAAGACAAGTAGTAATCATGTGTATAGTAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTCTCAAGAGGGCAGCGGTTTTCTCCAATGGAGATTCCAAAAGCACTGCCGGTTATGACCCTTCAATCAACCTTTCTAGGCCACTTCACTTGGACAAGGGCTCAGTGAGGCCACGGTGA 1218 0.4754 MGASGKWVKALIGLKKPDKDEHVKEGGKSKKWRLWRSSSGDMGSWKGFKGNHHREASEGSDSPPVLAADAYTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRGFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRTKLELLKQAEQCRSAQSYNSRTTNGSFCSLKSHESNKANWGWTWLERWMAAKPWESRLMEQSQAEALLDKTPLPKKFEEPFVNSNSKPCLVKVKKNNMTTRVSARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPISGNTCDRTDDSNGNAVARPNYMNLTQSTKAKLKTSSNHVYSRAQRQQSMDEFQFLKRAAVFSNGDSKSTAGYDPSINLSRPLHLDKGSVRPR* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0806 405 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Pvu9g0806 405 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Pvu9g0806 405 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Pvu9g0806 405 Pfam Protein of unknown function (DUF4005) 301 382 IPR025064 -
Pvu9g0806 405 MobiDBLite consensus disorder prediction 273 331 - -
Pvu9g0806 405 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Pvu9g0806 405 SMART iq_5 113 134 IPR000048 GO:0005515
Pvu9g0806 405 SMART iq_5 90 112 IPR000048 GO:0005515
Pvu9g0806 405 MobiDBLite consensus disorder prediction 376 405 - -
Pvu9g0806 405 Gene3D - 90 133 - -
Pvu9g0806 405 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 172 - -
Pvu9g0806 405 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 190 404 - -
Pvu9g0806 405 PANTHER IQ-DOMAIN 5-RELATED 1 172 - -
Pvu9g0806 405 PANTHER IQ-DOMAIN 5-RELATED 190 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0806 Pvu-Chr9 12770744 12773243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0806 1 405 IQD Protein Family AT2G26180 54.054 7.63e-115 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0806 - - gmx:100799714 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0378 1 3585319 3588513 Pvu9g0806 9 12770744 12773243 PCT