Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0804 ATGAAGGGAGGTACAGTGAAAGAAGAAGAAACCACCGCATTTGCAGCTGCTGCTGCTTCTTCTTCATCTTCATCCTCAACTTCCAACCTCTCCCCACAACCTAGGGAAGGGTTGCACGACGTGGGGCCCCCTCCGTTTCTCACCAAAACCTTTGACGTGGTGGAAGACCCTTCCACCAACGACATCGTTTCGTGGAGCAGGGCGCGCAACAGTTTCGTCGTTTGGGACTCTCACAAGTTCTCCACCACCATCTTGCCTCGTTACTTCAAGCACAACAACTTCTCCAGCTTCGTCCGACAGCTCAACACCTATGGTTTTAGAAAAGTTGATCCTGACAAATGGGAATTTGCGAACGAAGGGTTTCTGGCGGGACAGAGGCACTTGTTGAAGACGATCAAGAGAAGAAGGCACGTGGCACAGACACAGTCGCACGAGGGAGGAAGTGGAGCTTGTGTTGAATTGGGGGAGTTTGGATTGGAAGGCGAGATTGAGAGATTGATGAGAGACAGGGCAGTTTTGATGGCTGAAATTGTGAGGTTGAGGCAGCAACAGCACAATTCAAGGGAGCAATTGTTGTCCATTGAGACCAGATTGCAAGTCAGCGAGAAGAAACATCAGCAGATGATCACTTTTCTTGCTAAGGCACTCAACAATCAGACTTTTATTCAACAGTTCCTTCACAGGAACGCTCAGAAGATAGAGTTGCAAGGTGCTAGAAGAAAGAGGAGACTAACTGCTTCCCCAAGTGTGGAGAATTTGCAGCAAGATCCTGTGATTGATGTGGCATTGCCAGTTGAAGAGGATTCTACTACTATTGAGTCTCTTCTCTCAGCTGTTTGTGACGATGATCCATTAGAATCAAGCACTGAATTCGAAGACCCGATGTTAAATTCAGTTCCTAATACTGATGGTGGGAGTAATTTGGGGGTGGTAAGTGATGCAATCTGGGAGGACTTACTGAACCAAGACTTGGTTGCTGGGGACCCAGAGGAGGAAGTTGTGATTGGTGATTTTTCACAAGTTGATGTTCCTGTGGAGGATTTGGTTGCTGATCCTGATGAGTGGAGTGAGGATTTGCAGAATCTTGTGGATCATCTGGGTCATCTTGCGTCCAAACCCTAG 1122 0.4768 MKGGTVKEEETTAFAAAAASSSSSSSTSNLSPQPREGLHDVGPPPFLTKTFDVVEDPSTNDIVSWSRARNSFVVWDSHKFSTTILPRYFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLAGQRHLLKTIKRRRHVAQTQSHEGGSGACVELGEFGLEGEIERLMRDRAVLMAEIVRLRQQQHNSREQLLSIETRLQVSEKKHQQMITFLAKALNNQTFIQQFLHRNAQKIELQGARRKRRLTASPSVENLQQDPVIDVALPVEEDSTTIESLLSAVCDDDPLESSTEFEDPMLNSVPNTDGGSNLGVVSDAIWEDLLNQDLVAGDPEEEVVIGDFSQVDVPVEDLVADPDEWSEDLQNLVDHLGHLASKP* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0804 373 Pfam HSF-type DNA-binding 46 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu9g0804 373 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 324 IPR027725 -
Pvu9g0804 373 Gene3D - 39 136 IPR036388 -
Pvu9g0804 373 MobiDBLite consensus disorder prediction 15 34 - -
Pvu9g0804 373 ProSitePatterns HSF-type DNA-binding domain signature. 85 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu9g0804 373 PRINTS Heat shock factor (HSF) domain signature 46 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu9g0804 373 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu9g0804 373 PRINTS Heat shock factor (HSF) domain signature 97 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu9g0804 373 SMART hsfneu3 42 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu9g0804 373 MobiDBLite consensus disorder prediction 1 42 - -
Pvu9g0804 373 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 12 324 - -
Pvu9g0804 373 Coils Coil 163 183 - -
Pvu9g0804 373 SUPERFAMILY "Winged helix" DNA-binding domain 42 135 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0804 Pvu-Chr9 12751693 12753965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0804 32 373 HSF AT2G26150 51.156 7.41e-119 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pvu9g0804 HSF_DNA-bind 1.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0804 K09419 - gmx:100794605 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0804 9 12751693 12753965 Pvu9g0804 9 12751693 12753965 ECH
Pvu1g0376 1 3563513 3566108 Pvu9g0804 9 12751693 12753965 PCT