Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0794 ATGGGAATACCCAGAAAATGTTCATATTGTGGCAACTTAGGTCACAATTCAAGGACTTGTAAAACTCCCCTCGGTTACGGATACCTGAAGCTCTTTGGAGTGCAACTTCTCCTTTCTTCTTCTTCTTCTTCTTCATCATCCTCTACTGTTTCTTTTTCTTCACCTTCTTATTCTGCCATCAAACCATGTTTCAGCGCCAACTACTTGTTCTCTTCATCTCCTTCCCTGCTTCATCAAAATGAACATTCAGATGCTTACTTACTCAGTGCCAAGAGCCTCCTATCAAAATTTCAAGATACAAAAAAAGGTGTGGCATGGACAGAGGAGGAGCACAGGGTGTTTCTTGTAGGGCTTCAGAAGCTGGGGAAGGGAAACTGGAGAGACATATCTAAAAGTTTTGTGAAAACAAGAACACCTGTGCAAGTGGCAAGTCATGCACAAAAGTATTTTCTCCGACAATCTCAGAATACCTTTCTTAAAAGACAACACCGTTCCACCCTGTTCCATGTCCCTTCCTCGTCAACTTCAACTTCAACTCATTGCACTCTTGACATGGCAGCCCCAGATTTAGAACTTAAACTTGCAACTCCCACGCCTTTGGAGCTATAG 609 0.4269 MGIPRKCSYCGNLGHNSRTCKTPLGYGYLKLFGVQLLLSSSSSSSSSSTVSFSSPSYSAIKPCFSANYLFSSSPSLLHQNEHSDAYLLSAKSLLSKFQDTKKGVAWTEEEHRVFLVGLQKLGKGNWRDISKSFVKTRTPVQVASHAQKYFLRQSQNTFLKRQHRSTLFHVPSSSTSTSTHCTLDMAAPDLELKLATPTPLEL* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0794 202 Pfam Myb-like DNA-binding domain 105 150 IPR001005 -
Pvu9g0794 202 SUPERFAMILY Homeodomain-like 100 154 IPR009057 -
Pvu9g0794 202 PANTHER TRANSCRIPTION FACTOR KUA1 5 179 - -
Pvu9g0794 202 ProSiteProfiles Myb-like domain profile. 98 150 IPR001005 -
Pvu9g0794 202 CDD SANT 105 150 IPR001005 -
Pvu9g0794 202 SMART sant 102 152 IPR001005 -
Pvu9g0794 202 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 101 153 IPR006447 GO:0003677
Pvu9g0794 202 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 179 - -
Pvu9g0794 202 Gene3D - 106 155 - -
Pvu9g0794 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 154 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0794 Pvu-Chr9 12635880 12637469 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu9g0794 Myb_DNA-binding 1.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0794 - - pvu:PHAVU_009G077300g 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0794 9 12635880 12637469 Pvu9g0794 9 12635880 12637469 ECH