Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu9g0794 | ATGGGAATACCCAGAAAATGTTCATATTGTGGCAACTTAGGTCACAATTCAAGGACTTGTAAAACTCCCCTCGGTTACGGATACCTGAAGCTCTTTGGAGTGCAACTTCTCCTTTCTTCTTCTTCTTCTTCTTCATCATCCTCTACTGTTTCTTTTTCTTCACCTTCTTATTCTGCCATCAAACCATGTTTCAGCGCCAACTACTTGTTCTCTTCATCTCCTTCCCTGCTTCATCAAAATGAACATTCAGATGCTTACTTACTCAGTGCCAAGAGCCTCCTATCAAAATTTCAAGATACAAAAAAAGGTGTGGCATGGACAGAGGAGGAGCACAGGGTGTTTCTTGTAGGGCTTCAGAAGCTGGGGAAGGGAAACTGGAGAGACATATCTAAAAGTTTTGTGAAAACAAGAACACCTGTGCAAGTGGCAAGTCATGCACAAAAGTATTTTCTCCGACAATCTCAGAATACCTTTCTTAAAAGACAACACCGTTCCACCCTGTTCCATGTCCCTTCCTCGTCAACTTCAACTTCAACTCATTGCACTCTTGACATGGCAGCCCCAGATTTAGAACTTAAACTTGCAACTCCCACGCCTTTGGAGCTATAG | 609 | 0.4269 | MGIPRKCSYCGNLGHNSRTCKTPLGYGYLKLFGVQLLLSSSSSSSSSSTVSFSSPSYSAIKPCFSANYLFSSSPSLLHQNEHSDAYLLSAKSLLSKFQDTKKGVAWTEEEHRVFLVGLQKLGKGNWRDISKSFVKTRTPVQVASHAQKYFLRQSQNTFLKRQHRSTLFHVPSSSTSTSTHCTLDMAAPDLELKLATPTPLEL* | 203 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu9g0794 | 202 | Pfam | Myb-like DNA-binding domain | 105 | 150 | IPR001005 | - | |
Pvu9g0794 | 202 | SUPERFAMILY | Homeodomain-like | 100 | 154 | IPR009057 | - | |
Pvu9g0794 | 202 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 5 | 179 | - | - | |
Pvu9g0794 | 202 | ProSiteProfiles | Myb-like domain profile. | 98 | 150 | IPR001005 | - | |
Pvu9g0794 | 202 | CDD | SANT | 105 | 150 | IPR001005 | - | |
Pvu9g0794 | 202 | SMART | sant | 102 | 152 | IPR001005 | - | |
Pvu9g0794 | 202 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 101 | 153 | IPR006447 | GO:0003677 | |
Pvu9g0794 | 202 | PANTHER | MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN | 5 | 179 | - | - | |
Pvu9g0794 | 202 | Gene3D | - | 106 | 155 | - | - | |
Pvu9g0794 | 202 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 98 | 154 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu9g0794 | Pvu-Chr9 | 12635880 | 12637469 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pvu9g0794 | Myb_DNA-binding | 1.2e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu9g0794 | - | - | pvu:PHAVU_009G077300g | 372.859 |