Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0788 ATGGCAGAACAAAATAAGGAATGGGCTGTGGGAATTGACCTTGGCACAACATACTCATGTGTTGCTGTATGGCTAGAGGAACACTGTCGAGTGGAGATAATTCACAATGATCAGGGCTGTAGAACAACGCCTTCATCTGTGGCTTTCACAGAGAATCAAAGATTGATCGGTGATGCTGCTAAAAATCAGGCTGCTATTAACCCAACTAACACTGTCTTTGATGTGAAAAGGTTAATCGGCAGAAGATACAGTGATCCCATTATCCAGGACGATCTAAAGTTGTGGTCATTTAAGGTCATTGCTGATTCTGATGACAAACCCATGATAGCTGTTTCATACAAAGGTCAGGAGAAACACATTTCAGCTGAAGAAATCTCATCTATGATCCTCACAAAGATGCGGGAGACTGCAGAAGCGTACTTGGAATCAGGGGTTAAGAATGTTGTGGTTACTGTGCCTGCTTATTTTAATGACTCTCAGCGACAAGCAACCAAAGATGCTGGTACCATTGCTGGCCTCAATGTCATGCGGATAATCAATGAACCCACAGCTGCAGCTCTGGCATACGGCCTTGACAAGAGAGCAAAATGTGTTGTTGGAGAGAGAAATATTTTCATCTTTGATCTTGGTGGTGGTACATTTGACGTGTCTCTGCTCACAATCAAGGGTGATGTCTTCAAAGTCAAGGCCACTGCTGGTGACACGCACCTTGGAGGAGAGGACATGGATAACAGAATGGTAAAGTACTTCGTTGAGGAGTTCAAGAGGAAGAACAAAGTTGACATCAATGGGAACCGGAGAGCCTTGAGGAGGTTGAGAACTGCTTGTGAGAGAGCAAAAATAATAATAATAATTGAATGCGGACTGACCCACAAACTCATGGGCCAGCACTTATGCAGAGCGAGACCGAAAATCACTCGTGCAAGATTTGAGGAGCTCAACTTGGACCTCTTTAAAAGGTGTATGGAGACAGTAGATATGTGTCTTGTTGATTCTAAGATGGACAAGAGTGATGTAGATGATGTTGTTCTCGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAACAGCTATTGCAAGACTACTTCAAGGGGAAGGAACTGTGCATGAGCATCAACCCTGACGAGGTTGTTGCTTATGGAGCAGCAATTCCCAACTTAGTGTTATTAGATGCTACACGGCTGTCACTTGGTATATCTTTAAAAGGAGATCTCATGAGTGTTGTGATTCCTAGGAACACCACCATTCCTGTTGAGAAGAAAAAAGTATATGTTAAGATCAGAAGATTTCCCAATCTTATGTCCAAAGTAAAGGTTTACGAGTGTGAAAGGACAATAGCAAGTGATAACAATTTGCTTGATTTTTTTAATCTTTATGGCAATGTTGATGGTACTTTAAGTGTAATTGCTGAGGAAGAAAGCAGTGGAAGTAAGAACGGGATTACTGTAACCAACGACAAGGGAAGACTATCAACTCAACAAATTATGAGAATGATTCAAGATGCCGAGATATACAAGGCTGAAGACCAGAAGTACCAAAAGAAAGTTCAAGCAATTGATGCTAGCCAGCAGACAGAAACAGAGGTGTTTGTGGATCATCTGAATGAGGTGAAGAGCCTCATTGAACTCATTATGAGGATTAACTAG 1644 0.4209 MAEQNKEWAVGIDLGTTYSCVAVWLEEHCRVEIIHNDQGCRTTPSSVAFTENQRLIGDAAKNQAAINPTNTVFDVKRLIGRRYSDPIIQDDLKLWSFKVIADSDDKPMIAVSYKGQEKHISAEEISSMILTKMRETAEAYLESGVKNVVVTVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAALAYGLDKRAKCVVGERNIFIFDLGGGTFDVSLLTIKGDVFKVKATAGDTHLGGEDMDNRMVKYFVEEFKRKNKVDINGNRRALRRLRTACERAKIIIIIECGLTHKLMGQHLCRARPKITRARFEELNLDLFKRCMETVDMCLVDSKMDKSDVDDVVLVGGSSRIPKVQQLLQDYFKGKELCMSINPDEVVAYGAAIPNLVLLDATRLSLGISLKGDLMSVVIPRNTTIPVEKKKVYVKIRRFPNLMSKVKVYECERTIASDNNLLDFFNLYGNVDGTLSVIAEEESSGSKNGITVTNDKGRLSTQQIMRMIQDAEIYKAEDQKYQKKVQAIDASQQTETEVFVDHLNEVKSLIELIMRIN* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0788 547 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Pvu9g0788 547 PANTHER HEAT SHOCK 70 KDA PROTEIN 6 520 - -
Pvu9g0788 547 Gene3D Actin; Chain A, domain 4 238 320 - -
Pvu9g0788 547 Gene3D - 73 128 - -
Pvu9g0788 547 Gene3D - 10 381 - -
Pvu9g0788 547 PANTHER HEAT SHOCK PROTEIN 70KDA 6 520 IPR013126 GO:0005524|GO:0140662
Pvu9g0788 547 Gene3D - 194 368 - -
Pvu9g0788 547 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Pvu9g0788 547 PRINTS 70kDa heat shock protein signature 8 21 - -
Pvu9g0788 547 PRINTS 70kDa heat shock protein signature 38 50 - -
Pvu9g0788 547 PRINTS 70kDa heat shock protein signature 60 68 - -
Pvu9g0788 547 PRINTS 70kDa heat shock protein signature 148 168 - -
Pvu9g0788 547 PRINTS 70kDa heat shock protein signature 212 222 - -
Pvu9g0788 547 PRINTS 70kDa heat shock protein signature 339 355 - -
Pvu9g0788 547 PRINTS 70kDa heat shock protein signature 371 391 - -
Pvu9g0788 547 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 517 IPR029047 -
Pvu9g0788 547 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Pvu9g0788 547 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 382 535 IPR029047 -
Pvu9g0788 547 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pvu9g0788 547 Pfam Hsp70 protein 9 526 IPR013126 GO:0005524|GO:0140662
Pvu9g0788 547 SUPERFAMILY Actin-like ATPase domain 200 383 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0788 Pvu-Chr9 12576042 12579699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0788 1 520 Calmodulin-binding Proteins AT3G12580 62.094 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0788 K03283 - gmx:102667578 679.863