Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0784 ATGGGTATCTGCATATCCTCTGAATCTTCAGCGATTCATGGAGCGCCTGAAGAGGCTCGTGATGAAAGTGTATTGGTGTTTGAAGCAACCAAGCTTCTAAGGGGACTTTCCTCTGCTTACTCTAAACAAGGTAGCAAAGGACTCAACCAAGATGCTGCAACCCTTTGTCAGGTTTATGGGACGGAAAACACAGCATTTTGTGGTGTTTTTGATGGGCATGGAAGGAATGGTCACGTAGTCAGCAAAATAGTGAACAGCCGTTTGTGTTCACTCATACTGAACCAAAAAAAAGTGCATGCAAAGATTGAAAAAACGAACACCTTAGACAATGTGGACGAAGTTGAAGACGACTCATCAGCTCCACTAAACAAGAATTTTGAAGAATGGAAAGAAGCCATTCTTGATGGTTTCAGGGTAATGGACAAGGAGGTGAAGCTACAAGAGAATCTGGACTGCTCATGCAGTGGAACTACGGCTGTGGTTATCATAAGACAGGGTGAAGATCTTGTCATGGCTAACCTTGGTGACTCGAGAGCAATCTTGGGGACAATCTCGGACGGTGAAATCATGGCCATTCAATTGACCACGGATATGAAACCTGGATTACCTTGCGAAGCAGAACGCATAAAAAGTTGCAATGGGCGTGTATTTGCCCTGAAGGAAGAACCGCATATCCAGAGAGTGTGGTTACCCAATGAGAACTCCCCAGGTCTAGCCATGTCTCGGGCTTTTGGAGATTTCGTGCTCAAAGACCACGGTATCATTGCCATCCCGGATATTTCGCATCGCACTCTAACATCTAGCGACCAATTTATTGTTCTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACAAGGAGGTTTCCTCAATTGTGTGGGCAGCAGACTCTGAAAATGAAGCAGCAAGGGCTGTAGTGGAAGCATCAGCTTTAGCATGGAAAAACAAGTATCCTTCTTCTAAGCCTGATGACTGCACTGTGGTTTGCCTCTTCCTCCAGAAGAAACCACAGTTTCTACCCATCAAAAGTGGAAATCCATGA 1041 0.4524 MGICISSESSAIHGAPEEARDESVLVFEATKLLRGLSSAYSKQGSKGLNQDAATLCQVYGTENTAFCGVFDGHGRNGHVVSKIVNSRLCSLILNQKKVHAKIEKTNTLDNVDEVEDDSSAPLNKNFEEWKEAILDGFRVMDKEVKLQENLDCSCSGTTAVVIIRQGEDLVMANLGDSRAILGTISDGEIMAIQLTTDMKPGLPCEAERIKSCNGRVFALKEEPHIQRVWLPNENSPGLAMSRAFGDFVLKDHGIIAIPDISHRTLTSSDQFIVLASDGVWDVLSNKEVSSIVWAADSENEAARAVVEASALAWKNKYPSSKPDDCTVVCLFLQKKPQFLPIKSGNP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0784 346 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 337 - -
Pvu9g0784 346 Gene3D - 27 335 IPR036457 -
Pvu9g0784 346 ProSiteProfiles PPM-type phosphatase domain profile. 36 332 IPR001932 -
Pvu9g0784 346 PANTHER ALPHABET, ISOFORM E-RELATED 1 337 - -
Pvu9g0784 346 Pfam Protein phosphatase 2C 64 306 IPR001932 -
Pvu9g0784 346 CDD PP2Cc 37 332 IPR001932 -
Pvu9g0784 346 SUPERFAMILY PP2C-like 32 333 IPR036457 -
Pvu9g0784 346 SMART PP2C_4 29 330 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0784 Pvu-Chr9 12546295 12548144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0784 1 337 PP2C-type Phosphatase Gene Family AT5G26010 52.312 1.30e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0784 - - gmx:100795893 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0784 9 12546295 12548144 Pvu9g0784 9 12546295 12548144 ECH
Pvu1g0344 1 3258622 3261838 Pvu9g0784 9 12546295 12548144 PCT