Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0770 ATGGGAAGAGCACCTTGCTGTGACAAAGCAAACGTGAAGAAAGGACCATGGTCGCCTGAAGAAGATGCCAAACTCAAATCCTACATCGAACAGCACGGAACCGGAGGCAACTGGATCGCTTTGCCACAGAAGATTGGCCTTAAAAGATGTGGCAAGAGTTGCCGTCTCAGGTGGCTAAACTACCTCCGCCCTAACATCAAGCACGGTGGTTTCTCTGAAGAAGAAGATAACATCATTTGCAGTCTCTACGTTAGCATTGGAAGCAGGTGGTCGGTGATAGCAGCACAATTGCCAGGAAGAACTGATAATGACATAAAAAACTACTGGAACACGAGGCTGAAGAAGAAGCTTCTAGGGAAGCACCGTAAGGAACTGCAGGCACGTAACAAAGGAAACGGTGTCGTTAAGCAGGAGAGCAATTCCTCACTCTTGCTTCAGGAAAACAGTGTTCAACAACAGCCTTGTTGGCCACAGATTCCTGCGCTGCCACTTTCACCGTACACAAGTCAAACTCCAAGTTTCAATGACCAAGACTCTATTAGAAAACTTCTAATCAAGCTTGGAGGGAGATTCTCCGATGATTATCAACCCATCCTTGATGGGTTGAATCTTCAGTTTCCACACGTTTCTCTCTCATCAACACAACAAATTCAAGAGGAGGAACATGTTAGCTCCTCTGGATGCATGAACTCTATTGGCAACAGCCAAGTACAATTTGGTCAGAGTGCGTACTGTTCCGAGTTAGTGCAAGGGCAAGTGAGTTTCGCTTCCGCAGCTATTGGGGAAATGGTTTCTACTAATGATTATTCTCAAAGGTTATTAGGAGGGTTGGAGTTCTTCTATGGAGAGGAAATGATTAGCGATAAGATAATGGGGGGTTGTGCATCATCTTCATGTTGTGGGCAAAGTACTAATTGGGGTGAGACAAGTTCTTTGATGTATCCTCCTCTTGTTGCTTCGAGTTTCGAGGGTTTGAGGCAAGAGATGCCACGAGAAAGTGGTTTTCAAGAGTTGAGCTACCCGGGGACTCAATAG 1035 0.457 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKELQARNKGNGVVKQESNSSLLLQENSVQQQPCWPQIPALPLSPYTSQTPSFNDQDSIRKLLIKLGGRFSDDYQPILDGLNLQFPHVSLSSTQQIQEEEHVSSSGCMNSIGNSQVQFGQSAYCSELVQGQVSFASAAIGEMVSTNDYSQRLLGGLEFFYGEEMISDKIMGGCASSSCCGQSTNWGETSSLMYPPLVASSFEGLRQEMPRESGFQELSYPGTQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0770 344 CDD SANT 71 113 IPR001005 -
Pvu9g0770 344 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pvu9g0770 344 PANTHER OS09G0431300 PROTEIN 1 332 - -
Pvu9g0770 344 PANTHER TRANSCRIPTION FACTOR MYB36-LIKE 1 332 - -
Pvu9g0770 344 Gene3D - 70 143 - -
Pvu9g0770 344 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pvu9g0770 344 SMART sant 13 64 IPR001005 -
Pvu9g0770 344 SMART sant 67 115 IPR001005 -
Pvu9g0770 344 CDD SANT 16 62 IPR001005 -
Pvu9g0770 344 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pvu9g0770 344 Gene3D - 7 68 - -
Pvu9g0770 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pvu9g0770 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pvu9g0770 344 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pvu9g0770 344 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0770 Pvu-Chr9 12402422 12404230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0770 1 232 MYB Transcription Factor Family AT3G49690 57.647 1.42e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu9g0770 Myb_DNA-binding 2.3e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0326 1 3031372 3033489 Pvu9g0770 9 12402422 12404230 PCT