Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0763 ATGAAGGGCATGGATGAGAGTAGTACTGATGATGGAAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGAGGTTACTTCAGCAGCCACTGTTCCGACAACCTTCTACATGTCCTCTCCTCACATTTCCAGCTCAGGAATCTGTTACGGTGTCGGGGCAAATGGTAACTTCCATTCTCCTCTTACCGTTATGCCTATTAAGTCAGATGGGTCACTTTGTATCTTGGAAGCTCTCAATAGATCACAATCAGAAGTTATGGTGCCAAATTCTACGCCTAAATTGGAGGACTTCCTTGGTGGTGCAACTATGGGAAGTCACGAATATGGGAGCCACGAGAGAGGGGCAAATGCAATGGCCCTGAGTCTAGACAGCATCTATTATAGCACCCAAAATGCTCAGGCTCAACCCAACAGAGACACTCTCTCAGAACCCTTCAGGCAACAAGGGCATATGAACGTCCAAACGCACCCTTATTACTCAGGACTTGGTGGTTGCCACGGGATGTATCAAGCACAGTTGGAGGAAGAAGCAACGAAGGAAGCCCACGCTTCAGTTTGCAGCTCCCTAATGCCTCAAATGACAGAAAATAGTTTGAAAAACTGGGTGGCTACAAGGGAATATTCAACTCAACAGCAGATTTTGGAGCAGCAAATGAACTGTGGAATGGGGAATGAGAGAAGTGGCATGTCTCTTGGAACTGTGGGGTGTGGCGAGTTACAGTCACTGAGTTTATCGATGAGTCCCGGTTCTCAGTCTAGTTGTGTCACTGCACCTTCTGTGACAGATTCTGTGGCTGTGGATGCAAAGAAGAGAGGGCATGTAAAGGGTCAAAAGCAACCGGTGCACAGGAAATCTATTGACACATTTGGGCAGAGAACCTCTCAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGGTATGAAGCACATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAGACTAGGAAAGGAAGGCAAGTATATTTGGGGGGTTACGATATGGAAGAGAAAGCTGCAAGAGCGTATGATCTCGCGGCTCTTAAGTACTGGGGACCTTCAACGCATATAAACTTTTCGATTGAAAATTACCAAGTTGAACTTGAAGAAATGAAGAACATGAGCAGGCAAGAATATGTTGCACACTTAAGAAGAAAAAGCAGTGGATTTTCAAGGGGTGCTTCAATATACCGAGGGGTCACAAGGCACCACCAACATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCTGGGAACAAGGACCTATACCTTGGGACATTCAGCACTCAGGAGGAAGCAGCAGAAGCATACGATGTAGCCGCAATCAAATTTCGCGGCGCAAATGCAGTCACGAACTTCGACATATCAAGATACGATGTGGAGAGAATCATGGGCAGTATTAACCTTCTCGCTGGTGAGCTTGCAAGGAGAAATAAAGATAATGATCCAAGAAACGAGGGCAGTGAGTACAATATCGAAAAAAATAACAAGGGTGTGGTGACAAGTCAGAGCAACGAGGAAATGGTTCAAGGCAGAAACAACAATGAAAACGATTCTGAGTGGAAAATGGTTTTGTTGAATCACCCTTCACAGCAGCAACAGTCAAATGGCAGTGAGCAAAAACTGATGAACTGCGGAAATTATAGAAACAGTGCATTCTCTGGGGCCCTACAAGATCTCATTGGGATTGATTCGGTGGACATGTGTAGCAAAATTGGGACTCATTTTTCAAACGCGTCCTCGCTGGTAACAAGTTTGAGCAGCTCAAGAGAGGCTAGTCCTGAGAAAACGGGTCCCTCGCTTCTGTTTCCAAAGCCCCCAATGGAAACAAAGATTGTGAACCCCATTAGTACCAGTGTTACATCTTGGTTACCCTCACCAACGGTTCAAATGAGGCCACCTCCTGCTATTTCTTTGTCTCACTTGCCAGTTTTTGCTGCTTGGACTGATACTTAA 1974 0.4569 MKGMDESSTDDGNNHNWLGFSLSPHMKMEVTSAATVPTTFYMSSPHISSSGICYGVGANGNFHSPLTVMPIKSDGSLCILEALNRSQSEVMVPNSTPKLEDFLGGATMGSHEYGSHERGANAMALSLDSIYYSTQNAQAQPNRDTLSEPFRQQGHMNVQTHPYYSGLGGCHGMYQAQLEEEATKEAHASVCSSLMPQMTENSLKNWVATREYSTQQQILEQQMNCGMGNERSGMSLGTVGCGELQSLSLSMSPGSQSSCVTAPSVTDSVAVDAKKRGHVKGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYQVELEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMGSINLLAGELARRNKDNDPRNEGSEYNIEKNNKGVVTSQSNEEMVQGRNNNENDSEWKMVLLNHPSQQQQSNGSEQKLMNCGNYRNSAFSGALQDLIGIDSVDMCSKIGTHFSNASSLVTSLSSSREASPEKTGPSLLFPKPPMETKIVNPISTSVTSWLPSPTVQMRPPPAISLSHLPVFAAWTDT* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0763 657 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 655 - -
Pvu9g0763 657 SMART rav1_2 402 466 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 SMART rav1_2 300 372 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 CDD AP2 401 462 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 SUPERFAMILY DNA-binding domain 401 462 IPR016177 GO:0003677
Pvu9g0763 657 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 13 655 - -
Pvu9g0763 657 ProSiteProfiles AP2/ERF domain profile. 402 460 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 SUPERFAMILY DNA-binding domain 299 368 IPR016177 GO:0003677
Pvu9g0763 657 MobiDBLite consensus disorder prediction 593 612 - -
Pvu9g0763 657 Pfam AP2 domain 300 358 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 Pfam AP2 domain 402 452 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 CDD AP2 299 365 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 MobiDBLite consensus disorder prediction 498 518 - -
Pvu9g0763 657 Gene3D AP2/ERF domain 402 462 IPR036955 GO:0003700|GO:0006355
Pvu9g0763 657 Gene3D AP2/ERF domain 299 368 IPR036955 GO:0003700|GO:0006355
Pvu9g0763 657 MobiDBLite consensus disorder prediction 484 518 - -
Pvu9g0763 657 PRINTS Ethylene responsive element binding protein signature 301 312 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 PRINTS Ethylene responsive element binding protein signature 442 462 IPR001471 GO:0003700|GO:0006355
Pvu9g0763 657 ProSiteProfiles AP2/ERF domain profile. 300 366 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0763 Pvu-Chr9 12286871 12290865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0763 10 486 AP2-EREBP Transcription Factor Family AT4G37750 54.455 7.83e-159 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pvu9g0763 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0763 K09285 - gmx:100787223 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0763 9 12286871 12290865 Pvu9g0763 9 12286871 12290865 ECH
Pvu1g0317 1 2907733 2912245 Pvu9g0763 9 12286871 12290865 PCT