Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0732 ATGTTAACCACCGTCAACAACGACCACTCCTTCTCCGCTTTCAGCGACTGCAACAGCGACAGATCCGCCGAATTCTCCACACCGTCTTCCGAGACCCGCCGCCTCCTCATCGCCTGCTCCGCCGACAATTCCGACGAATTCATTCGTCACCTCCTTCACAACCTCCATTCCTGTTCCATCGAAGAGCAGAAACAAGCCACCATGGAAATCAGGCTACTCGCCAAGAACAAGCAAGAGAACCGCGTCAAGATCGCGAAAGCCGGCGCCATTCAACCCTTGGTTTCACTTCTATCGTCCTCGCCAGACCTCCAGCTGCAGGAGAACGTGGTGACCGCGATTCTCAATCTCTCGCTCTGCGACGAGAACAAAGAGCTGATCAATTCCTCAGGAGCGGTGAAGCCTCTTGTGGGAGTTCTGGAGACGGGGACGCCGACGGCGAAGGAGAACGCAGCGTGCGCACTGCTCCGGCTCTCGCAGAGAGAGGAGGACAAGGTCTCGATAGGGAGGGCGGGGGCAATTCCGCCTCTGGTGAAGCTTCTGGAAGGTGGGGGGTTGCGCGGGAAGAAGGACGCGGCGACGGCGCTCTACGCGGTGTGTTCGGCGAAGGAGAACAAGGTGAGGGCGGTGAGGGCGGGGGTTATGAGGGCGCTGGTGGAGCTGATGGCGGACTTGGGGTCGAGCATGGTGGACAAGGCGGTGTACGTGGTGAGCGTGGTGGTTGGGGTGGCGGAGGGGAGGGTGGCGCTGGTTGATGAAGGGGGGATTCCGGTGCTGGTGGAGATAGTGGAGGTGGGGACGCAGAGACAGAAGGAGATCGCGGTTGGGGTTCTATTGCAGATTTGCGAGGAGAGTTGGGTGTACCGTACTATGGTGGCCCGCGAAGGAGCCATTCCACCCCTCGTTGCTTTCTCACAGTCACACTCCCACTCCCATCGCCCCAGACACAAGGCCCAGAAACTAATAGAGCTTTTACGGCAACCAAGATCCGGCGATGGCGCTGCTCGTACCTAG 1011 0.5945 MLTTVNNDHSFSAFSDCNSDRSAEFSTPSSETRRLLIACSADNSDEFIRHLLHNLHSCSIEEQKQATMEIRLLAKNKQENRVKIAKAGAIQPLVSLLSSSPDLQLQENVVTAILNLSLCDENKELINSSGAVKPLVGVLETGTPTAKENAACALLRLSQREEDKVSIGRAGAIPPLVKLLEGGGLRGKKDAATALYAVCSAKENKVRAVRAGVMRALVELMADLGSSMVDKAVYVVSVVVGVAEGRVALVDEGGIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAIPPLVAFSQSHSHSHRPRHKAQKLIELLRQPRSGDGAART* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0732 336 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 88 131 IPR000225 GO:0005515
Pvu9g0732 336 Gene3D - 187 328 IPR011989 -
Pvu9g0732 336 SMART arm_5 201 241 IPR000225 GO:0005515
Pvu9g0732 336 SMART arm_5 160 200 IPR000225 GO:0005515
Pvu9g0732 336 SMART arm_5 77 118 IPR000225 GO:0005515
Pvu9g0732 336 SMART arm_5 119 159 IPR000225 GO:0005515
Pvu9g0732 336 SMART arm_5 242 282 IPR000225 GO:0005515
Pvu9g0732 336 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 3 332 - -
Pvu9g0732 336 SUPERFAMILY ARM repeat 44 309 IPR016024 -
Pvu9g0732 336 Gene3D - 38 183 IPR011989 -
Pvu9g0732 336 PANTHER U BOX DOMAIN-CONTAINING 3 332 - -
Pvu9g0732 336 Pfam Armadillo/beta-catenin-like repeat 78 117 IPR000225 GO:0005515
Pvu9g0732 336 Pfam Armadillo/beta-catenin-like repeat 120 158 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0732 Pvu-Chr9 11912427 11914363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0732 26 331 U-box Gene Family AT2G23140 49.020 2.21e-82 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0732 - - gmx:100782449 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0278 1 2528965 2531058 Pvu9g0732 9 11912427 11914363 PCT