Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu9g0710 | ATGGAGACTCGGGCTGCGGCAAAGAGAAAGAAGGAAAGTGGTGTGGTGGTGGAAAAGCAGCACCCCAAGAAGCGTAGGGTTGTATTGGGTGAACTCTCCAATTTACCAAACCTTATTGTCCCCAAAACTCAAGATCTGAGCAAACAGAAACGGCAGTGTCTGAAAAATTCCAATATCAAGAAACTATATTCCCTAAATAATACCCTTTCTTCTCTCCAGATTGACCAACAGTATGCTTCCCACATCGATGAGTATCTTCGTGCAATGGAGACAAAGAGAAGACCAATGGTTAACTACATGGACAAAGTTCAGTTGGTAGTTACCACAAACATGAGAGAAATATTGGTGGATTGGTTAGTAGATGTTGCTGTTGAGTACAAGCTTCTCTCTGAAACTCTTCATCTCTCTGTGTCATATATAGATAGGTTTTTATCTGTTAGTCCTGTGACCAAATCGAGGCTTCAGTTACTGGGTGTTTCTTCTATGCTCATTGCTTCGAAGTACGAGGAAGCTAATCCACCCCGTGTGGAGAAATTTTGCAGCATCACTGATAACACCTATGAAAAGAAAGAGGTTGTAAAGATGGAAACTGAAATACTCCAGTCCCTAAACTTTGAAATGGGCAATCCTACTTCAATCACCTTTCTAAAGAGGTGTTTGGGTGTTGCTTCTGTGAATAAAAAAACACCAAATTTGAAGGTTGAGTTTCTGAGCTTCTACCTTGCTGAGCTAAGTTTGTTGGATTATGATTGCATAAGATTCTTGCCTTCAATTGTGGCAGCATCATCTTTATTTCTTGCCAGTTTTATTATCTCCCCTGAAGTGCATCCTTGGACTTCTTCCCTGCGTGAATGGTCAGGTTACAAACCAGCTGAGTTGAAAGTTTGTGTTCTCACTTTGCATGACTTGTATTTTTCAAGAAAGGCAGCATCTTCCCGATCTGTTAGGGATAAATATAAGCAGCACAAGTTCAAGTATGTGGCAAACCTGCCGTCTCCTCCACATGTACCAAGTTATTACTTTGAAGATTAG | 1032 | 0.4089 | METRAAAKRKKESGVVVEKQHPKKRRVVLGELSNLPNLIVPKTQDLSKQKRQCLKNSNIKKLYSLNNTLSSLQIDQQYASHIDEYLRAMETKRRPMVNYMDKVQLVVTTNMREILVDWLVDVAVEYKLLSETLHLSVSYIDRFLSVSPVTKSRLQLLGVSSMLIASKYEEANPPRVEKFCSITDNTYEKKEVVKMETEILQSLNFEMGNPTSITFLKRCLGVASVNKKTPNLKVEFLSFYLAELSLLDYDCIRFLPSIVAASSLFLASFIISPEVHPWTSSLREWSGYKPAELKVCVLTLHDLYFSRKAASSRSVRDKYKQHKFKYVANLPSPPHVPSYYFED* | 344 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu9g0710 | 343 | CDD | CYCLIN | 111 | 200 | IPR013763 | - | |
| Pvu9g0710 | 343 | PIRSF | Cyclin_A_B_D_E | 1 | 339 | IPR039361 | - | |
| Pvu9g0710 | 343 | PANTHER | CYCLIN-A3-1-RELATED | 18 | 342 | - | - | |
| Pvu9g0710 | 343 | SMART | Cyclin_C_2 | 210 | 333 | IPR004367 | - | |
| Pvu9g0710 | 343 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Pvu9g0710 | 343 | ProSitePatterns | Cyclins signature. | 112 | 143 | IPR006671 | - | |
| Pvu9g0710 | 343 | CDD | CYCLIN | 210 | 301 | IPR013763 | - | |
| Pvu9g0710 | 343 | Pfam | Cyclin, N-terminal domain | 84 | 207 | IPR006671 | - | |
| Pvu9g0710 | 343 | PANTHER | CYCLINS | 18 | 342 | IPR039361 | - | |
| Pvu9g0710 | 343 | SMART | cyclin_7 | 214 | 302 | IPR013763 | - | |
| Pvu9g0710 | 343 | SMART | cyclin_7 | 117 | 201 | IPR013763 | - | |
| Pvu9g0710 | 343 | Pfam | Cyclin, C-terminal domain | 210 | 332 | IPR004367 | - | |
| Pvu9g0710 | 343 | SUPERFAMILY | Cyclin-like | 73 | 207 | IPR036915 | - | |
| Pvu9g0710 | 343 | Gene3D | - | 82 | 329 | - | - | |
| Pvu9g0710 | 343 | Gene3D | - | 95 | 208 | - | - | |
| Pvu9g0710 | 343 | SUPERFAMILY | Cyclin-like | 210 | 335 | IPR036915 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu9g0710 | Pvu-Chr9 | 11702206 | 11704419 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu9g0710 | 3 | 343 | Core Cell Cycle Gene Families | AT5G43080 | 54.203 | 2.87e-125 | 362 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu9g0710 | K06627 | - | gmx:100786875 | 518.464 |
Event-related genes