Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0703 ATGTGGTTCATCCTTCTCCCTCTTATTATGTCTCTGCAACTTTCATCTTTAGCAGTACAAATCCTGCACCAAGGTTCATCCCTCTCAGTGGAGGACCCCAATGATGTTATGCTCTCACCAAATGCAATCTTCTGTGGCGGTTTCTATGCCGTTGGCCAAAACGCATATTCCTTCGCAGTTTGGTTCTCCCAACCCAACTGCCAAACCCGGAATGCAACCGTCGTATGGATGGCGAACCGTGACTACCCCGTAAACGGCAAGGGCTCGAAGCTTTCCCTTCTTAACAACGGCAACCTTGCCTTAAAGGACGCTGACGAATCCCACGTTTGGTCCACAAACACCGTTTCACTGTCGTCTGTGCAACTGTTTCTCGACGACACTGGCAACCTCGTTCTGCGTGAAACCAAGGCTGGCGGTGTCGTCATCTGGCAGAGCTTTGATTTCCCTACGGACACGCTTTTGCCTCAACAAGTGTTCACGAGAAATGCCAAACTGGTCTCTTCTACGAGCGAGACCAACAAGTCCTCCGGTTTCTACACCTTCTTCTTCGACAACGACAACATTCTTCGTCTTCTTTACGATGGTCCTGAAGTTTCCGGCCTTTACTGGCCAGATCCATGGTTGGCCACTTGGGACGCTGGACGTTCCACTTTCAACAACAGTCGAGTTGCGGTTATGGACACACTCGGCAATTTTAGTTCTTCAGATGATTTATCTTTTGTGACATCTGATTTTGGCACTGTGATCCAAAGAAGATTAGTGCTTGATCATGATGGAAACATTCGTGTTTATAGTCGCAGACACGGTGGAGAAAAATGGTCTACTACGTGGCAAGCCAAAGCAAGACCGTGTTCTATTCATGGTATTTGTGGCCCTAACAGTTTGTGCTCTTATCATCAAAATTATAGTGTGAAGTGCTCTTGCCTTCCCGGGTATCAGTGGAGGAATGATCACGATTGGTCTTATGGATGTGAACCGAAATTCTCTACGCTTTGCAACAAAGACGAGTCTCGGTTTTTGTATATAAGCAACGTGGAGTTATATGGCTATGAGTCTGGGATTATGACAAATTACACTCTCCGTCAGTGTCAGGATTTATGCCTTCAATTATGCAACTGTAAAGGTATTCAGTATACATATGTCTCTGGCAGAGGCACTTATACTTGTTACCCGAAGTTGCAGTTGCGGAATGCGTATCGGACACCGTATTTCAACGCTGATTTGTACTTGAAACTGCCAGCAAATAGTTCATATTCTTTTGAAGGATCCACAGATGACCACAGTCTTGATTGTTCTTCGAGTTCGAGGACGATGCAGCTTGAGAGAGCTTATGTCATGAGTCATGAAAACAGATACGTTAAGTTCTTGCTTTGGTTTGTAGGAGGAGTGGGGGCTTTTGAAGTTTTGTGCATATTTGTTATTTGTTTTTTTGTGGTGAGAACAAGGGAGCGAAAATACTCTGGTGTGGATAGAGGAGTCTATCATTTGGCAATGACTGGTTTCAGAAAGTTCAGTTATTCTGAACTGAAACAAGCCACCAAAGGGTTTCGCGAGGAGATAGGAAGGGGTGCAGGAGGGGTTGTATTCAAAGGTGTGTTGTTGGATCAAAGAGTTGCGGCTGTGAAGAGACTCAAGGATGCTAACGAAGGAGAAGAAGATTTCCTCGCAGAAGTAAGCAGCATTGGAAGGCTTAACCATATGAATTTGATCGAGATGTGGGGGTATTGCGCTGAGGGAAAACATAGACTATTGGTGTATGAGTACATGGAAAATGGGTCTCTAGCACAAAATATGGAGTCCGATGAATTGGACTGGACCAAAAGGTTTGACATTGCGCTAGGTACAGCAAGAGGGTTGGCTTATGTTCACGGGGAATGTTTGGAGTGGATCCTACACTGTGATGTAAAGCCCCAAAACATTCTTCTTGATTCTAACTATCATCCAAAGGTAGCGGATTTTGGGCTGTCCAAGCTCCGAAACAGAAATGATACTAGTACATACTCCAGTTTTTCACGGATACGAGGAACAAGAGGGTACATGGCTCCTGAGTGGGTTTTAAACCAACGAATCACGTCCAAAGTTGATGTTTATAGCTATGGAATTGTTGTTTTGGAAATGGTAACTGGAAAGAGTGCAACAAAGGACGTTGTTGACAGGGATAATGGAGTGGAGAAACAGCATCTCAGCATGGTGGGGTGGCTTAAAGATAAAAAGAAAAGTGAATGTGGTTGGGTTAGTGAAGTCTTGAAACCCAATGTAAAAGGAGTTTATGAGGAAGAGAAGATGGAAGCTTTGGTGAGAGTGGCTCTGCAATGCGTTGAGGAAGAAAAGGAGAAGAGACCCACAATGAGTCAAGTATTAGAAACGCTTCAGAAATGTAGCCGCCAATATGATTATCTACGATCATCACAAATCAGTGTCGTCTCATAA 2430 0.4449 MWFILLPLIMSLQLSSLAVQILHQGSSLSVEDPNDVMLSPNAIFCGGFYAVGQNAYSFAVWFSQPNCQTRNATVVWMANRDYPVNGKGSKLSLLNNGNLALKDADESHVWSTNTVSLSSVQLFLDDTGNLVLRETKAGGVVIWQSFDFPTDTLLPQQVFTRNAKLVSSTSETNKSSGFYTFFFDNDNILRLLYDGPEVSGLYWPDPWLATWDAGRSTFNNSRVAVMDTLGNFSSSDDLSFVTSDFGTVIQRRLVLDHDGNIRVYSRRHGGEKWSTTWQAKARPCSIHGICGPNSLCSYHQNYSVKCSCLPGYQWRNDHDWSYGCEPKFSTLCNKDESRFLYISNVELYGYESGIMTNYTLRQCQDLCLQLCNCKGIQYTYVSGRGTYTCYPKLQLRNAYRTPYFNADLYLKLPANSSYSFEGSTDDHSLDCSSSSRTMQLERAYVMSHENRYVKFLLWFVGGVGAFEVLCIFVICFFVVRTRERKYSGVDRGVYHLAMTGFRKFSYSELKQATKGFREEIGRGAGGVVFKGVLLDQRVAAVKRLKDANEGEEDFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAQNMESDELDWTKRFDIALGTARGLAYVHGECLEWILHCDVKPQNILLDSNYHPKVADFGLSKLRNRNDTSTYSSFSRIRGTRGYMAPEWVLNQRITSKVDVYSYGIVVLEMVTGKSATKDVVDRDNGVEKQHLSMVGWLKDKKKSECGWVSEVLKPNVKGVYEEEKMEALVRVALQCVEEEKEKRPTMSQVLETLQKCSRQYDYLRSSQISVVS* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0703 809 SMART ntp_6 334 412 IPR003609 -
Pvu9g0703 809 Pfam S-locus glycoprotein domain 239 313 IPR000858 GO:0048544
Pvu9g0703 809 CDD B_lectin 38 149 IPR001480 -
Pvu9g0703 809 SMART blect_4 25 149 IPR001480 -
Pvu9g0703 809 CDD STKc_IRAK 520 792 - -
Pvu9g0703 809 SMART serkin_6 514 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0703 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 204 IPR036426 -
Pvu9g0703 809 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 4 795 - -
Pvu9g0703 809 Pfam D-mannose binding lectin 73 164 IPR001480 -
Pvu9g0703 809 Pfam PAN-like domain 332 389 IPR003609 -
Pvu9g0703 809 ProSiteProfiles Bulb-type lectin domain profile. 13 145 IPR001480 -
Pvu9g0703 809 SUPERFAMILY Protein kinase-like (PK-like) 494 791 IPR011009 -
Pvu9g0703 809 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Pvu9g0703 809 Gene3D Phosphorylase Kinase; domain 1 480 588 - -
Pvu9g0703 809 CDD PAN_AP_plant 332 413 - -
Pvu9g0703 809 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Pvu9g0703 809 Gene3D - 18 148 IPR036426 -
Pvu9g0703 809 Gene3D Transferase(Phosphotransferase) domain 1 589 806 - -
Pvu9g0703 809 ProSiteProfiles Protein kinase domain profile. 514 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0703 809 Pfam Protein kinase domain 518 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0703 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Pvu9g0703 809 PIRSF SRK 1 807 IPR024171 GO:0004674
Pvu9g0703 809 Gene3D - 149 279 IPR036426 -
Pvu9g0703 809 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0703 Pvu-Chr9 11641205 11643634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0703 450 796 Receptor kinase-like Gene Family AT5G45780 34.366 9.44e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu9g0703 Pkinase 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0703 - - gmx:100792388 1290.79