Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0696 ATGGCCAATCACCACCACTATCATCATGCGCATGACACCAACCTCAAATCCCTTCTCGACACCCTATACTGCTCCGAAGAGCATTGGGAGGAACACGTTGGGGAAGATGAATTAGACCAAACAGAGGATGATTACCTAAGCGCTAATAATACTTCTAATAATAACACTACCGGTGGCAGCACCATAATAAACTCCGTTCACAACCCTCATGTGTTGTCGGAAAGCGACATGTTTTGTGACGAGCAAGAGTTGGCATCGCTGCTGGGGAAAGAACAACACAACCCTCTAAGCACTTGCCTCCAAACCAACCCTGCGTTGGAGTGTGCTCACAGAGAAGGCGTGGAGTGGATGCTCAGAGTGAACGCTCACTACTCCTTCTCTGCTCTCACAGCTCTTCTTGCCGTCAACTACTTTGACCGCTTCCTCTCCACCCTCCACTTTCAGGATGGCAAGCCATGGATGACTCACCTCGCTGCCGTCGCTTGCCTCTCTCTCGCTGCCAAAGTGGAGGAGACACAAGTTCCCCTTCTCCTAGACCTTCAAGTGGAGGAGGGTAGATACTTGTTCGAAGCCAAAACGATTAAAAGGATGGAGATTTTGGTACTTTCCACTCTTGGATGGAAGATGAACCCGCCAACCCCTCTGTCCTTTCTTGATTACATCACAAGAAGACTTGGATTGAAGGATCATCTCTGCTGGGAGTTCCTCAGGAAGTGCGAAGGCCTTCTTGTCTCTGTCCTCGGAGATTGGAGGTTAATGGGTTATCTACCGTCTGAATTGGCAAGTGCTACGATGATGCACGTTGTGAAAAGCGTGAAGCCTTGTCTAGAAGGTGAATACCAGAGGCAACTCTCGGGTATTCTGGGATTCGACAAGGAGAAGGTGAACGAGTGTAGGAAGGTGTTGGAATTGTGGTCAGGGTACGGGAAGCAGGGGAAGCAATGCACGAAACGCAAGTTTGTAAGCATTCCCGGAAGTCCAAACGGCGTGATGGAGATGTCGTTTAGCTGTGATAGCTCGAATGAGTCGTGGGCAGTAGCTGCAGCAGCTGCCGCCGCCGCTGCTTCAGTGTGTTCTTCACCGGAAGCTTTGTCGAAGAAGAGTAGAAGTGAAGTAAAGCGATAA 1125 0.4987 MANHHHYHHAHDTNLKSLLDTLYCSEEHWEEHVGEDELDQTEDDYLSANNTSNNNTTGGSTIINSVHNPHVLSESDMFCDEQELASLLGKEQHNPLSTCLQTNPALECAHREGVEWMLRVNAHYSFSALTALLAVNYFDRFLSTLHFQDGKPWMTHLAAVACLSLAAKVEETQVPLLLDLQVEEGRYLFEAKTIKRMEILVLSTLGWKMNPPTPLSFLDYITRRLGLKDHLCWEFLRKCEGLLVSVLGDWRLMGYLPSELASATMMHVVKSVKPCLEGEYQRQLSGILGFDKEKVNECRKVLELWSGYGKQGKQCTKRKFVSIPGSPNGVMEMSFSCDSSNESWAVAAAAAAAAASVCSSPEALSKKSRSEVKR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0696 374 Pfam Cyclin, N-terminal domain 93 210 IPR006671 -
Pvu9g0696 374 SMART Cyclin_C_2 212 339 IPR004367 -
Pvu9g0696 374 Gene3D - 211 300 - -
Pvu9g0696 374 SUPERFAMILY Cyclin-like 195 302 IPR036915 -
Pvu9g0696 374 SMART cyclin_7 115 203 IPR013763 -
Pvu9g0696 374 Pfam Cyclin, C-terminal domain 212 320 IPR004367 -
Pvu9g0696 374 CDD CYCLIN 111 202 IPR013763 -
Pvu9g0696 374 PANTHER CYCLIN D3.1 PROTEIN 61 369 - -
Pvu9g0696 374 SUPERFAMILY Cyclin-like 82 210 IPR036915 -
Pvu9g0696 374 PANTHER CYCLINS 61 369 IPR039361 -
Pvu9g0696 374 Gene3D - 108 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0696 Pvu-Chr9 11553719 11555872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0696 65 371 Core Cell Cycle Gene Families AT5G67260 49.196 4.76e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0696 K14505 - gmx:100811122 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0696 9 11553719 11555872 Pvu2g0157 2 1724756 1726646 ECH
Pvu9g0696 9 11553719 11555872 Pvu3g2475 3 46363155 46365135 ECH
Pvu9g0696 9 11553719 11555872 Pvu7g0392 7 3071377 3073726 ECH
Pvu9g0696 9 11553719 11555872 Pvu9g0696 9 11553719 11555872 ECH
Pvu1g0254 1 2226702 2228463 Pvu9g0696 9 11553719 11555872 PCT