Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0692 ATGCCGAACACAAACCACCCATTACTGTTCCTGCTCCTGCTCCTGCTCGTGCACGCTTCTTCATACGCACATTCCTCCCAACTCCAACACCGTCATATTCCGCCGTTAGTTTTCACGGACGCCAGCGCCCTCCTCGCCTTCAAACTTAAAGCCGACGTTAACAACCACCTTGACTTCTCCCCCCTCCCGCGCGGCCTTCGCTTCTGCGCTTGGCCCGGCGTCCAATGCAACGGTCCCAAAGTAGAGCGTCTCCTTCTCCAGGGCTTAGATCTCGGCGGCGTTTGGGCTCCAAACACACTCACACGTCTCGACCAGCTCCGAGTCCTCAGTTTACAGAACAACTCACTCACCGGAACCATACCGGACCTCACCTCTCTCTTCAATCTCAAAAGCCTCTTCCTCGACAACAACCAATTCACCGGTTCTCTCCCTCCCTCACTCTTCTCTCTCCACCGTCTACGAAATTTGGATTTCTCTCACAACAATCTCTCTGGACCTATCTCCGCTGCGTTCACTAACCTAGACCGTCTTCACACACTCCGTCTTAGTTTTAACGATTTTAGCGGTTCAATACCTCCGTTTAACCAATCCTCTCTCAGAATACTTGAAATTTCCGGCAACAACCTCTCCGGCGCGATTCCGGTGACGCCGACGCTGTTTCGTTTTCCGCCGTCTTCCTTCGCGTTCAACCCTAACCTCTGCGGTGAAATCATCCGCGTGCAATGCAGTCCTGCGAAGCCTTTCTTCGGGTCCGCGCCGCCGCCTACGGCGGCTATAGGTCAAAGCGCGCAGGTGCACGGCGTCAATGGCATAATCGGACAGCCGTACGTGAAGAAGCGGCACGACCGGCGGGCTGTGATAATCGGTTTCTCCGCCGGCGTGTTCGTTTTAGTTTGCTCGCTGGCATGCTTCGCTGCAGCGGTGAGGAAGCAGAGGAGCCGATGCAACAAGGACCAGCGGTCCGGAATGATGGCGGGGGATGTCGCGGCGACGGCGGAGGCCGCGGCGGTGATGCGGATGGAGATGGAGAGAGAGTTGGAGGAGAAGGTGAAGAGAGCGGAGGTGGCGAAGAGTGGGAGTTTGGTATTCTGTGCGGGTGAGGCGCATGTGTATACGCTGGACCAGTTGATGAAGGGTTCCGCGGAGCTTTTAGGAAGAGGGTGTTTGGGAACCACTTACAAGGCGGCTCTTGATAACCGTCTGATGGTGACGGTGAAGCGCCTTGATGCGGGAAAAATGGCTGCCCATGCAACGAAGGAAGTGTTCGAACGACACATGGAATCCGTCGGTGCACTTCGACACCCCAATTTGGTTCCTCTTAGGGCCTATTTCCAGGCAAAGCAGGAGAGACTCATTATCTATGACTTTCAGCCCAATGGCAGTCTGTTCTCCCTCATACATGGATCGAGATCAAGCAGGGCAAGGCCATTACACTGGACATCATGCTTAAAAATAGCAGAGGACGTAGCACAAGGTTTGGCCTTCATCCACCAGGCATGGAGACTGGTCCATGGCAATCTCAGGTCCTCCAATGTCCTTCTTGGACCTGATTTCGAGGCATGCATCACAGATTACTGCCTCTCCGTGTTGACAAACCCATCCACATTTGATGAAGATGGGGATTCAGCAGCGTACAGAGCTCCAGAGACTCGCAACCCCAATCATCAGCCAACCCACAAATCCGATGTTTATGCGTATGGGATTTTGTTGCTTGAGCTTCTGACGGGAAAATTTCCCTCGGAGCTTCCATTCATGGTTCCTGGTGAAATGTCAAGTTGGGTGCGGTCCATCAGGGATGACAATGGGGGCGAAGATAGCCGAATGGACATGCTTCTTCAGGTGGCTACAACTTGTAGCTTGACCTCACCGGAGCAGAGGCCAACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATCAAAGAGATTGTACTATTGGAGGATACTACTGAATTGGAATTGCAGAGTGGTAATGCCATGCCTTAG 1983 0.535 MPNTNHPLLFLLLLLLVHASSYAHSSQLQHRHIPPLVFTDASALLAFKLKADVNNHLDFSPLPRGLRFCAWPGVQCNGPKVERLLLQGLDLGGVWAPNTLTRLDQLRVLSLQNNSLTGTIPDLTSLFNLKSLFLDNNQFTGSLPPSLFSLHRLRNLDFSHNNLSGPISAAFTNLDRLHTLRLSFNDFSGSIPPFNQSSLRILEISGNNLSGAIPVTPTLFRFPPSSFAFNPNLCGEIIRVQCSPAKPFFGSAPPPTAAIGQSAQVHGVNGIIGQPYVKKRHDRRAVIIGFSAGVFVLVCSLACFAAAVRKQRSRCNKDQRSGMMAGDVAATAEAAAVMRMEMERELEEKVKRAEVAKSGSLVFCAGEAHVYTLDQLMKGSAELLGRGCLGTTYKAALDNRLMVTVKRLDAGKMAAHATKEVFERHMESVGALRHPNLVPLRAYFQAKQERLIIYDFQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLAFIHQAWRLVHGNLRSSNVLLGPDFEACITDYCLSVLTNPSTFDEDGDSAAYRAPETRNPNHQPTHKSDVYAYGILLLELLTGKFPSELPFMVPGEMSSWVRSIRDDNGGEDSRMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDTTELELQSGNAMP* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0692 660 Gene3D Ribonuclease Inhibitor 38 220 IPR032675 -
Pvu9g0692 660 SUPERFAMILY Protein kinase-like (PK-like) 382 637 IPR011009 -
Pvu9g0692 660 ProSiteProfiles Protein kinase domain profile. 378 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0692 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 648 - -
Pvu9g0692 660 Gene3D Transferase(Phosphotransferase) domain 1 458 652 - -
Pvu9g0692 660 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 9 648 - -
Pvu9g0692 660 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Pvu9g0692 660 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Pvu9g0692 660 Gene3D Phosphorylase Kinase; domain 1 342 456 - -
Pvu9g0692 660 SUPERFAMILY L domain-like 39 216 - -
Pvu9g0692 660 Pfam Protein tyrosine and serine/threonine kinase 382 636 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0692 Pvu-Chr9 11506912 11510666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0692 8 658 Receptor kinase-like Gene Family AT5G43020 55.142 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu9g0692 PK_Tyr_Ser-Thr 1.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0692 - - var:108341030 1180.24