Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0688 ATGGGTACTCCTGCAGTTGAACACATTTCAGAATGTTTTGTGAAGCCTCACCCCTACAACAACTTCCCCAACCAAATCTGTAATCTAACACCATGGGATATTGCCATGTTGTCTGTGCACTATATCCAGAAGGGTTTGCTCTTCAGCAAGCCTGCAACTCTTGTGGATCAACAATATTTCATGGAGAATCTGTTGAAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCACTCTCTGGTCGTCTTGTCACCCACAAAACCCAACAACCTCCCTCTTATACTGTTTCTGTTGATTGCAACAACAGTGATGGAGCTCGATTCATCTATGCAACCTTAGATGTCACCATATCTGACTTACTCTCCCCAGTTGACACCCCTTCCGTTTTTCACTCATTCTTTGACCACCACAAAGCACTCAACCATGACGGTCACACCATGCCCTTGTTGTCCATCCAAGTCACTGAACTAGTGGATGGTGTTTTCATAGGTTGCTCCATGAATCACTCTCTAGGAGATGGCACTTCGTATTGGAATTTCTTCAATACATGGTCGCAGATCTTTCAGGCACAATCTCAGGCTGAACGCTGTGAATATGATGTTCCCATCTCACGCCAACCCATTCACAATCGTTGGTTTCCAAATAATTGTAGACCACCGATCTCCCTTCCATTCAAACATCATGAGGAGTTTATAGAGAGATCTGAAAAAACAACCTTGCTGAGAGAGAGAGTTTTCCATTTTTCAGCAGAGTCTATTGCTAAACTGAAAGCAAAGGCCAACTCAGAATCCAACACCACACAAATTTCTTCTTTCCAGTCATTATCAGCACTTGTTTGGAGATCGATAACTCGTGCGCGCTCCCCACCGTCTGACCAAATAACGATTTGTAGATTAGCCGCAAACAGTCGATCAAGAATGGAACCTCCTCTGCCTGAAGAATACTTTGGAAACTGCATTCATGCAGTGAGTGCAGAAACGACAAAAGGGGAATTACTTGAGAATGATTTAGGATGGGCAGCATGGAAGTTGCATATGGCTGTTGCAAACCTTAGCAATCGAGTGGTGTTGCAGTATCTGCAAGAGTGGTTAGAGTCTCCTTTGATATATCAAATGGGTCGTTTCTTTGATCCGTACTGTGTGATGATGGGTAGCTCGCCCAGGTTCAATATGTATGGAAGTGAATTTGGAATGGGGAAAGCGGTGGCTGCTAGAAGTGGGCATGCAAATAAATTTGATGGGAAAGTGTCATCATACCCAGGGCGTGAAGGAGGAGGAAGCATTGATTTGGAAGTTTGCCTTTTGCCACATTCAATGAGTGCCTTGGAATCAGACAAGGAGTTCATGAATGCAGTTTCTGTGTTCAATCCCTTGCTGTTGTAG 1392 0.4418 MGTPAVEHISECFVKPHPYNNFPNQICNLTPWDIAMLSVHYIQKGLLFSKPATLVDQQYFMENLLKKLKHSLSLTLSHFYPLSGRLVTHKTQQPPSYTVSVDCNNSDGARFIYATLDVTISDLLSPVDTPSVFHSFFDHHKALNHDGHTMPLLSIQVTELVDGVFIGCSMNHSLGDGTSYWNFFNTWSQIFQAQSQAERCEYDVPISRQPIHNRWFPNNCRPPISLPFKHHEEFIERSEKTTLLRERVFHFSAESIAKLKAKANSESNTTQISSFQSLSALVWRSITRARSPPSDQITICRLAANSRSRMEPPLPEEYFGNCIHAVSAETTKGELLENDLGWAAWKLHMAVANLSNRVVLQYLQEWLESPLIYQMGRFFDPYCVMMGSSPRFNMYGSEFGMGKAVAARSGHANKFDGKVSSYPGREGGGSIDLEVCLLPHSMSALESDKEFMNAVSVFNPLLL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0688 463 Pfam Transferase family 6 452 - -
Pvu9g0688 463 Gene3D - 2 228 IPR023213 -
Pvu9g0688 463 Gene3D - 229 447 IPR023213 -
Pvu9g0688 463 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 455 - -
Pvu9g0688 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0688 Pvu-Chr9 11404482 11405873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0688 68 446 Monolignol Biosynthesis Gene Families AT5G48930 28.010 2.56e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0688 - - vra:106761257 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0688 9 11404482 11405873 Pvu9g0688 9 11404482 11405873 ECH