Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0686 ATGGTTACCCCTGCCTTTCGTCGCATTTCCGAGTGCTTCGTCAAGCCGCACCGCCCCACCCAAGTGTCAAACCAAATATGCAATTTAACGCCTTGGGATATTGCTATGTTGTGTGCCCACTATATCCAGAAGGGTCTACTTTTCAAGAAGCCTTCAACACTAGTTCATCAACATCATTTCATAGATAAACTCTTGGAGAACCTCAGACACTCTCTTTCTCTCACCCTCTCCGATTTCTACCCATTAGCTGGCCGCCTCGTCACCCGCAAAACCCAAGACCCTCCCTCTTATGCTGTTTTCATTGATTGCGAAAACAGTGATGGAGCTAGATTCATCTATGCAACCTTGGACATCACCATATCTCACATACTCTCTCCCATTGACGTCCCACCCATTCTTCACTCATTCTTTGACCACCACAAAGCAGTCAACCACGATGGTCACACCATGCCTTTGTTGTCCATCCAAGTCACTGAACTAGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCATGCTATTGCTGATGGCACTTCTTATTGGAATTTCTTCAATACATGGTCTCGGATCTTTCAAGCCCATGTCCAAGCTCAAGGCCACGAATATGAAGTTTCCACTTCACATCAACTCATTCACAATAGATGGTTTCCGAATGATTGCAGTCCTCCAATCAATCTTCCTTTCAAACATCACGACGAGTTTATTACCAGATTTGAAGCACCCTTTCTGAGAGAGAGAGTCTTCCACTTTTCGGCAGACTCTATTGCGAAACTGAAAGCAAAAGCCAACTCAGAGTGCAATACCACAAAAATCTCTTCATTCCAGTCATTATCAGCACTTGTTTGGAGATGCATAACTCGTGCCCGCTCCCCACGCTACGACCAAAGAACAAGTTGCAAGTTGGCCACAAACAATCGATCAAGAATGGAACCACTGCCTGAGGAATACTTTGGAAACTCAATTCATTTAGTGAGTGCAGAAACAACGACAGGGGAATTACTTGAGAATGGTCTAGGATGGGCAGCGTGGAAGTTACACTTGACTGTTGCAAACCATAATGAGACAGTGGTACTGCAATTTCTCAAAGAGTGGTTACAATCTCCTTTGATATATGAACTTGGTCGTTTCTTTGACCCCTACTGTGTGTCGATGGGTAGCTCGCCCAGGTTTAACGTGTATGGAAATGAGTTTGGAATGGGAAAAGCAGTGGCCGCTAGAAGTGGGTATGCTAACAAGTTTGACGGGAAAGTGACATCATATCCAGGTCGTGAAGGAGGGGGAAGCATTGATTTGGAAGTTTGTCTTTCACCAGATAATATGAGCATGCTAGAATCCGATGAAGAGTTCATGAATGCAACTTCTATTAGCATTATTCCAGATGTTCAATATCAAATTTAG 1398 0.4406 MVTPAFRRISECFVKPHRPTQVSNQICNLTPWDIAMLCAHYIQKGLLFKKPSTLVHQHHFIDKLLENLRHSLSLTLSDFYPLAGRLVTRKTQDPPSYAVFIDCENSDGARFIYATLDITISHILSPIDVPPILHSFFDHHKAVNHDGHTMPLLSIQVTELVDGVFIGCSMNHAIADGTSYWNFFNTWSRIFQAHVQAQGHEYEVSTSHQLIHNRWFPNDCSPPINLPFKHHDEFITRFEAPFLRERVFHFSADSIAKLKAKANSECNTTKISSFQSLSALVWRCITRARSPRYDQRTSCKLATNNRSRMEPLPEEYFGNSIHLVSAETTTGELLENGLGWAAWKLHLTVANHNETVVLQFLKEWLQSPLIYELGRFFDPYCVSMGSSPRFNVYGNEFGMGKAVAARSGYANKFDGKVTSYPGREGGGSIDLEVCLSPDNMSMLESDEEFMNATSISIIPDVQYQI* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0686 465 Pfam Transferase family 11 450 - -
Pvu9g0686 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
Pvu9g0686 465 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
Pvu9g0686 465 Gene3D - 236 445 IPR023213 -
Pvu9g0686 465 Gene3D - 9 222 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0686 Pvu-Chr9 11380562 11382101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0686 26 444 Monolignol Biosynthesis Gene Families AT5G48930 27.009 1.35e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0686 - - gmx:100789881 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0686 9 11380562 11382101 Pvu9g0686 9 11380562 11382101 ECH