Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0681 ATGATGGATACTCCCATCTTACAACGGGTCTCAGAATGCTTCATCAAAGCAAAACACTCCACCCAAAAATCAAACCAAATCTGCCACTTAACACCTTGGGATATTGCCATGTTATCTGCACACTATATCCAAAAGGGTCTTCTCTACAAGAAGCCTGAACCACTTGTTAATCAACATGATTTCATAGAGAATCTGTTGGAGAAGCTCAAACACTCTCTTTCGCTCACCCTCTCCCATTTCTATCCATTGTCTGGTCGTCTTGTCACTCACAAAACCAAAGACCCTCCCTTCTATGCTGTTTTCGTCGATTGCACAAATAATTCTGGAGTCAAATTCATCCATGCAACTTTAGATATGACCATATCTGATATCCTCTCCCCGCTTGATGTCCCACCCATTGTTCAATCATTGTTTGATCACGACAGAGCACTCAACCACGATGGTCACACCATGCCGCTCTTGTCCATCCAAGTCACTGAACTACTGGATGGTGTTTTCCTAGGTTGTTCTATGAACCACTGTATTGGTGATGGCACTTCTTATTGGAATTTCTTCAACACGTGGTCCGAGATCTTTCAAGCTCAAGGCCACGAACATGATGTTCCCATATCCCACCCTCCCATTCACAATCGCTGGTTTCCGAATGATTGCGTTCCACCAATCAATCTTCCTTTCAAACACCACGAGGAGTTTATCAGCAGGTATGAAGCACCCTTGATGAGAGAGAGAATATTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAAGCCAACTCGGAATGCAATACCACAAAAATCTCTTCCTTCCAATCACTGTCAGCGCTTGTTTGGAGATGCATAACTCGGGCGCGGCGCTTGGGGCCTGATCAGAAAACAAGTTGCAAGTTATCGACAAACAACCGAAGAAGAATGGAACCGCCTCTGGCTGAGGAGTACTTTGGAAACTCGATTCATACGCTGGGTGCAGGAACAGCCAGGTCAGGGGAATTGCTTGGGAATGGTCTGGGATGGGCAGCATGGAAGTTGCACCTTGCTGTTGTAAACCATAACGACAGAGTGGTGTTGGGATGGGTGAGAGAGTGGTTAGAGTGTCCTCTGATATATCAACTTGGTCGGTATTTTGACCCCTACTGTGTGATGATGGGAAGCTCACCCAGATTCAACATGTATGGTAATGAGTTTGGAATGGGAAAAGCACTCGCAGTTAGAAGTGGGTATGCCAACAAATTTGATGGAAAAGTTACGTCGTATCCAGGCCATGAAGGAGGAGGAAGCGTAGATTTAGAAGTATGTCTTTCGCCACTTGTAATGACAGCACTAGAATCAGATCAAGAGTTCATGGACTCAGCTTCTTCACCTTCCAATACTCACTAA 1380 0.4493 MMDTPILQRVSECFIKAKHSTQKSNQICHLTPWDIAMLSAHYIQKGLLYKKPEPLVNQHDFIENLLEKLKHSLSLTLSHFYPLSGRLVTHKTKDPPFYAVFVDCTNNSGVKFIHATLDMTISDILSPLDVPPIVQSLFDHDRALNHDGHTMPLLSIQVTELLDGVFLGCSMNHCIGDGTSYWNFFNTWSEIFQAQGHEHDVPISHPPIHNRWFPNDCVPPINLPFKHHEEFISRYEAPLMRERIFHFSAESIAKLKAKANSECNTTKISSFQSLSALVWRCITRARRLGPDQKTSCKLSTNNRRRMEPPLAEEYFGNSIHTLGAGTARSGELLGNGLGWAAWKLHLAVVNHNDRVVLGWVREWLECPLIYQLGRYFDPYCVMMGSSPRFNMYGNEFGMGKALAVRSGYANKFDGKVTSYPGHEGGGSVDLEVCLSPLVMTALESDQEFMDSASSPSNTH* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0681 459 Gene3D - 229 444 IPR023213 -
Pvu9g0681 459 Pfam Transferase family 15 449 - -
Pvu9g0681 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 451 - -
Pvu9g0681 459 Gene3D - 9 219 IPR023213 -
Pvu9g0681 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0681 Pvu-Chr9 11313783 11315201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0681 67 443 Monolignol Biosynthesis Gene Families AT5G48930 29.825 4.71e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0681 - - gmx:100787228 785.408