Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0661 ATGGTGGCAGCATCAGCATACGAGGAGAGTCGTCGCAAGAGATTAGAGGAAAACAGGAAGAGAATGGAAGCTCTCAATCTCCCTCTCCTCTCTCGAGCCCTTCACAAATCTCATTCTCCCGCTTCCTCCCCTTCGAAATCGGTGAAGAAGCGCAACATTCAGGAACCAATGGTTGTCGTGAGAAGATCAGGCCGTCTGGCCAACTTGCCATCTCCTATTTACAAAGAAATAGTTATTGATCGGGTCTCTATAGCTCGAAGAAATATTGGCAATAGGCACAGAGATTTTGTTAACAGAGTATACGCTTCCGATGAATCCAGGAAAGAAGCTTTAGAAAAAGCAGAAAACTTAACGTCGGGTTTAGAATCTGATTACCCGAACTTCATAAAGTCTATGCTCCAGTCCCATGTCAGTGGAGGCTTCTGGCTGGGCCTTCCAGTCCATTTCTGCAAGAGCAATCTTCCAAAAGGGGATGAAGTGATGACTTTGATTGATGAAGATGGGAATGAGTATCCAACAATATATTTGCCACGTAAATCAGGACTTAGTGGGGGATGGAAAGGTTTTGCTGTTGCTCATGACCTAGCTGATGGGGACGCTTTAATTTTCCAATTAATCAGGCGCACAGCATTCAAGGTGTACATTATTAGAGCAAATAGTGCTTCAGAGGATAAACAACTCAAGTGA 687 0.4425 MVAASAYEESRRKRLEENRKRMEALNLPLLSRALHKSHSPASSPSKSVKKRNIQEPMVVVRRSGRLANLPSPIYKEIVIDRVSIARRNIGNRHRDFVNRVYASDESRKEALEKAENLTSGLESDYPNFIKSMLQSHVSGGFWLGLPVHFCKSNLPKGDEVMTLIDEDGNEYPTIYLPRKSGLSGGWKGFAVAHDLADGDALIFQLIRRTAFKVYIIRANSASEDKQLK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0661 228 Pfam B3 DNA binding domain 128 218 IPR003340 GO:0003677
Pvu9g0661 228 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 2 222 IPR044837 -
Pvu9g0661 228 SMART B3_2 128 219 IPR003340 GO:0003677
Pvu9g0661 228 MobiDBLite consensus disorder prediction 29 54 - -
Pvu9g0661 228 Gene3D - 102 221 IPR015300 -
Pvu9g0661 228 MobiDBLite consensus disorder prediction 36 50 - -
Pvu9g0661 228 Coils Coil 218 228 - -
Pvu9g0661 228 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Pvu9g0661 228 CDD B3_DNA 126 217 IPR003340 GO:0003677
Pvu9g0661 228 PANTHER B3 DOMAIN-CONTAINING PROTEIN 2 222 - -
Pvu9g0661 228 SUPERFAMILY DNA-binding pseudobarrel domain 122 219 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0661 Pvu-Chr9 11080670 11085027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0661 48 223 B3 DNA Binding Superfamily AT5G42700 60.221 1.07e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pvu9g0661 B3 1.5e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0661 - - gmx:100797091 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0661 9 11080670 11085027 Pvu9g0661 9 11080670 11085027 ECH