Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0586 ATGACGGAACCTCAGAATCCTTCACCATTCACACATTCTTCAGCTTCGGAAATCGCACCACAACCACAACCACAACCTCCGCCACCTCCCAAAAGGAAACGAAGCCTCCCTGGAATGCCAGATCCAGATGCTGAAGTGATTGCTTTGTCACCGAAGACGCTGATGGCGACGAACCGTTTCGTTTGCGAGATCTGTAACAAAGGGTTCCAGCGCGATCAGAATCTGCAGCTTCACCGGCGCGGTCACAACTTGCCGTGGAAGCTGCGGCAGCGAGGGAGCAAGGAACCGCGGAAGAAAGCGTACGTGTGCCCCGAGCCTTCCTGCGTCCACCACAACCCCGCCAGGGCGCTCGGCGACCTGACCGGCATCAAGAAGCACTTCTGCAGAAAACACGGCGAGAAAAAGTGGAAATGCGAACGCTGCTCTAAGAAATACGCTGTACAGTCGGACTGGAAAGCTCATATGAAAACTTGCGGCAGCAGAGAGTACCGATGCGACTGCGGCGCCTTGTTCTCGAGGAGGGATAGTTTCATCACGCACAGAGCATTTTGTGATGTATTAGCGCAAGAGAGCGCCAAAGCCCAAAATGTTAGCACTAGCAACGCTGATGTGCCTTCTTCGCCCCCTGCACCTCCACTCACTCCCTCTGCCACCGTCGTCTCTCCAACTTTGTCCATTCAGAGCTCCGAAAACCCAAGGAAGCTATCACCAATGTCTCCAAACGCAACGTGCTTCGTGACAAGCAGCACCCCTTCCGGTTCCACTGTTTGTACCACTGTTTTTGCGAGTGTGTTGGCACCGTCCACAACGACAACTCATTCACAATCCCAATCACCGTCACCATCAACTTCCTCGTTCTTCAACCTCATGTCAAACTTGGCTCGCTCGGATAACCCTAAGGCCATATCTAACCTGAGAGAACCCACATCCCTCTCCCTCTCCTCACCACTCTATCTCTCCAATAATGACTCTCCCCACTTCACAGCATCTCCTCAACCTGCTCTGTCTGCCACTGCATTACTCCAAAAAGCAGCTCAAATGGGTGCATCCAGTGGTTCCCTTCTTCGTGGCTTAGGCTTAGCAAAGACACCATCATCATCATCATCCTTGGGGAAACACCAGCGTTTTAACATCAATGCAACCACAACCGCACAATGGTGTTGGGAAAAACGGGTAATTTTCCCACTAAAACAAAACTCTAACAGAGCTACCCGACAAATAATATTGAATAAATAA 1236 0.5138 MTEPQNPSPFTHSSASEIAPQPQPQPPPPPKRKRSLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRGSKEPRKKAYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGSREYRCDCGALFSRRDSFITHRAFCDVLAQESAKAQNVSTSNADVPSSPPAPPLTPSATVVSPTLSIQSSENPRKLSPMSPNATCFVTSSTPSGSTVCTTVFASVLAPSTTTTHSQSQSPSPSTSSFFNLMSNLARSDNPKAISNLREPTSLSLSSPLYLSNNDSPHFTASPQPALSATALLQKAAQMGASSGSLLRGLGLAKTPSSSSSLGKHQRFNINATTTAQWCWEKRVIFPLKQNSNRATRQIILNK* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0586 411 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 11 404 - -
Pvu9g0586 411 SMART c2h2final6 101 131 IPR013087 -
Pvu9g0586 411 SMART c2h2final6 60 82 IPR013087 -
Pvu9g0586 411 SMART c2h2final6 136 156 IPR013087 -
Pvu9g0586 411 MobiDBLite consensus disorder prediction 197 240 - -
Pvu9g0586 411 Pfam Zinc-finger of C2H2 type 60 82 - -
Pvu9g0586 411 MobiDBLite consensus disorder prediction 217 240 - -
Pvu9g0586 411 Gene3D Classic Zinc Finger 40 107 - -
Pvu9g0586 411 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 11 404 - -
Pvu9g0586 411 MobiDBLite consensus disorder prediction 1 19 - -
Pvu9g0586 411 MobiDBLite consensus disorder prediction 20 35 - -
Pvu9g0586 411 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 82 IPR013087 -
Pvu9g0586 411 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Pvu9g0586 411 Gene3D Classic Zinc Finger 114 195 - -
Pvu9g0586 411 MobiDBLite consensus disorder prediction 1 44 - -
Pvu9g0586 411 SUPERFAMILY beta-beta-alpha zinc fingers 59 157 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0586 Pvu-Chr9 10419646 10422701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0586 31 378 IDZ Gene Family AT5G66730 54.569 6.17e-126 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu9g0586 zf-met 0.0029 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0586 K25869 - gmx:100800089 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0586 9 10419646 10422701 Pvu9g0586 9 10419646 10422701 ECH