Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0565 ATGAATTTTCAGCAAGACAAATTTGTTAGATTTCGTGATTGGAATTCAGACAAGGGTTCTGAGAGCAGCTCTCCTGCAATTCATGTAGAACGCCAGGGGGGGATCAAGAATAAACTAAATTCAGTTTCTGAGAAGTTTCAAAGGGGTGTGGAATCTAGTTCAGAGGGGATGAAGAGATTTAGAAAATCATTCAAATCTCTTCCCTATAACAGAGTTCTCTCTAGAAGTTTTAGTTCTAGAAAGAAAATTCTTGATCCCCAGGGTCCTTTCCTTCAAAAGTGGAATAAGATATTTGTATTATCATGTCTTATTGCTGTGTCGCTTGATCCCTTGTTCTTCTATGTTCCTGTGATTGATGATGACAATAAATGTCTTTCTCTGGACAGAAAAATGGAAATTACAGCAACTGTTTTAAGATCTTTCTCTGATATTTTTTATATAATCCATATAATTTTCCAATTTCGTACTGGATTCATTGCTCCCTCTTCTCGAGTATTTGGGAGAGGTGTTTTGGTTGAAGATGCTTGGGTAATAGCAATGCGGTATCTTTCATCATACTTCTTAATTGACATTCTTGCCGTTCTTCCCCTCCCACAGGTGGCAATTCTAATTATCATTCCAAAGTTGAGGGGCTCTGAATCACTGAATACAAAGACCTTGCTGAAATTTATTGTCTTCTTCCAATATATACCACGATTTTTGCGATTAATTCCATTATATAAAGAAGTTACTAGGACCTCTGGCATCCTCACTGAAACAGCTTGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTAGCAAGTCATGTTATTGGTGCCTTTTGGTACTTGTTTTCTATAGAAAGAGAAACCACATGCTGGCAAGATGCGTGTCGAAGAAATAGCACATGTAACACAGAAGCTATGTATTGTGATAATCATAAAGTTTTGGGCACAATTTCAGTATTCCTGAATGCTTCTTGCCCAATACAGGATCAAAATACAACACTCTTTAATTTTGGAATATTTCTTGATGCCCTTCAATCTGGAGTTGTGGAATCAAGAGATTTCCCACAGAAGTTCTTTTATTGTTTTTGGTGGGGCCTACGAAATTTGAGTTCTCTTGGTCAGAACCTTGCAACAAGTACTTATGTTTGGGAAATCTGCTTTGCAATTTTCATTTCAATTGCTGGTTTGGTATTATTTGCATTCCTCATTGGAAATATGCAGACATATTTGCAGTCAACGACTACCAGATTGGAGGAAATGAGGGTGAAAAGGAGAGATGCTGAGCAGTGGATGTCTCATCGATTACTCCCTGACAGCCTGAGAGAAAGAATCAGACGACATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAAGACAATTTGATCCGAGATCTTCCAAAGGATTTGAGAAGGGATATTAAGCGGCATCTTTGCTTAGCTTTGCTGATGAGGGTGCCAATGTTTGAGAAAATGGATGAGCAACTTCTGGATGCAATGTGTGACAGACTGAAGCCAGTGCTGTACACAGAAGAAAGCTGCATCGTCCGGGAAGGAGATCCTGTTGATGAGATTCTCTTCATAATGCGGGGCAAGCTATTGACTGTGACCACTAATGGTGGAAGAACTGGCTTCTTTAACTCTGAATACCTCAAGGCTGGCGACTTTTGTGGAGAGGAACTTCTCACGTGGGCATTAGATCCTCACTCCTCATCCAACCTTCCCATATCAACTAGGACTGTCCAAACTCTTTCAGAAGTGGAAGCATTTGCTCTGAAAGCCGATGACTTGAAGTTTGTTGCATCACAGTTCCGGCGCCTTCATAGCAAGCAGCTTCGTCACACTTTCAGGTTTTATTCACAACAATGGCGTTCATGGGCTGCATGTTTCATACAAGCAGCGTGGAGGCGTTACAGTAAAAAGAAGCTGGAAGAGTCTCTGAGGGAAGAAGAGAATAGGTTGCAAGATGCATTGGCCAAAGCAGGTGGTAGCTCGCCTAGTCTAGGTGCCACAATATATGCTTCAAGGTTTGCAGCTAATGCACTCAGACTTTTACGTAGAAATAGCACAAGAAAGGCCAGAGTGCCAGAAAGAATATCACCCATGCTGCTGCAGAAGCCTGCTGAGCCTGATTTTACTTCTGAAGAACAATAA 2148 0.4092 MNFQQDKFVRFRDWNSDKGSESSSPAIHVERQGGIKNKLNSVSEKFQRGVESSSEGMKRFRKSFKSLPYNRVLSRSFSSRKKILDPQGPFLQKWNKIFVLSCLIAVSLDPLFFYVPVIDDDNKCLSLDRKMEITATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDAWVIAMRYLSSYFLIDILAVLPLPQVAILIIIPKLRGSESLNTKTLLKFIVFFQYIPRFLRLIPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVIGAFWYLFSIERETTCWQDACRRNSTCNTEAMYCDNHKVLGTISVFLNASCPIQDQNTTLFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLGQNLATSTYVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRHEQYKWQETRGVDEDNLIRDLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEILFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRSWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKAGGSSPSLGATIYASRFAANALRLLRRNSTRKARVPERISPMLLQKPAEPDFTSEEQ* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0565 715 SMART cnmp_10 486 617 IPR000595 -
Pvu9g0565 715 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 713 - -
Pvu9g0565 715 SUPERFAMILY Voltage-gated potassium channels 85 408 - -
Pvu9g0565 715 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 713 - -
Pvu9g0565 715 Gene3D Helix hairpin bin 412 477 - -
Pvu9g0565 715 Pfam Ion transport protein 94 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu9g0565 715 Coils Coil 638 658 - -
Pvu9g0565 715 Pfam Cyclic nucleotide-binding domain 507 597 IPR000595 -
Pvu9g0565 715 Gene3D - 97 410 - -
Pvu9g0565 715 CDD CAP_ED 486 617 IPR000595 -
Pvu9g0565 715 Gene3D Jelly Rolls 484 604 IPR014710 -
Pvu9g0565 715 SUPERFAMILY cAMP-binding domain-like 415 608 IPR018490 -
Pvu9g0565 715 ProSiteProfiles cAMP/cGMP binding motif profile. 486 570 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0565 Pvu-Chr9 10166590 10173555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0565 1 714 Ion Channels AT5G53130 79.526 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0565 K05391 - gmx:100817516 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0565 9 10166590 10173555 Pvu9g0565 9 10166590 10173555 ECH