Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0563 ATGATGGAATGCAACAAAGATGAAGCAGTTAGGGCCAAAGAAATAGCTGAGAGGAAATTTTCAGAAAGGGAATATGTTGGTGCAAAGAAATTTGCTCTCAAGGCTCAAAATCTGTATCCTGATTTGGAGGATATTACCCAGCTTTTGACAACAATTGATATCTATATATCTGCTGAGAATAAAGTAAGCGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAAGATACTGTCAGGAAGCAATACAGGAAGCTGGCTCTCACCCTCCACCCTGACAAAAACAAGTCTTTGGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTCGAATATAACCAGAAGAGGAGTTTGAAAGGATTCCAGCATAACACTTCCAACCATGTTGGATCTAAATCAGATGCACCCAATGCAAATGGTTTTTATAATTTAAAGAAGAATGTAACTTCAAATGTCAGGACTGGAAATAATAATGGTCGGGCCCCTTCAACTGCAGTTCCTCCTTCACATAAAAAGGCTGATACCTTTTGGACTATCTGCAATCGGTGCAGGACACATTATGAATATCTCAGGATTTATTTGAATCACACCCTTTTATGTCCAAACTGTAATGAAGCTTTTGTTGCTGTCGAGAGGGGTCCACCACCAAACGTTTTTAAGCCACCAAATTGGTCTTCTCATCAACAACGGCATCAAAATTCTCAACACTCTACTGGAAGTAATAATACAAACTTTCAGTGGGGTTCTCACAATAGAATGGCTAGTTTTGGTAGCACAGACGGATCAACATCTGTTGCAGCTCAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTAAGGAGAGAGGGTTCTTTTCACAAAGCTGAAAAACCTATGAAAAAAAGAAGGACAGATGATATTCGCATTAATGGCTATCAAGGATACATGGCTAATCATATGACTGGGGGACACGGAGCAGCTGGTTTGGGCAGCTTTTCTGAATCAGGAAAGGCTAACGTGGAAGCAGAAAGGAATCATGGTTTTTCAGGTCTGCCTGGAAAGCATTACAGCACAAGGGAATTGTCGATGTTTGAAATGCGAAACATGTTGATGGACAAGTCACGCAATGAAATTATTAAGAAACTTCAAGAATGGAAATCAATGGCTGAAGCTAAGATTAACATGGATAAGGAGAATAAGAGACAGAAAAGCGCATTTAATGGCAAAACAACTGGTTCAGAAAAGCTGAGAGGGCCTTCTGTCAATGGTAACAGGCATCCAAACATTGATTCTTTCCCTGTCAGAAGTGATGATACACTTCAGAAGAACCAAGCTTATGTTACCATCAATGTTCCAGACCCTGATTTTCATAACTTTGATTTGGACAGAGATGAAAGTTCCTTTGTGGAAGACCAGGTGTGGGCTGCGTATGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCTATAAAGCCATTTAAAATGCGGATCAGTTGGCTTAATTCTCGAAGCAACAGCGAATTGGGCCCAATGGATTGGGTGGGCTCTGGTTTTTATAAGACTTGTGGGGATTTCAGAACTGGCAAGCATGAAATATCTGAATCATTAAATTCTTTCTCTCACAAGGTTAGGTGGACAAAAGGCACGAGAGGTGTTGTTCGCATCTTTCCTGGAAAGGGGGAAGTGTGGGCTCTTTACAGGGACTGGTCTCCTGATTGGAATGAACATACCCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTTCTCGAAGATTTCAATGAAGAACAGGGCATCATGGTTACCCCTCTTGTTAAGGTTGCTGGTTTTAGGACTGTGTTTCAAAGGCATGCGGATCGTGTTCAGGAGAGGAGGATTCTTAAAGAAGAAATGTTTCGATTCTCTCATCAGGTTCCTAATTACCTGTTAACAGGCCAAGAAGCTCAGAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCCGCTACTCCTTTAGACCTCCTTCAGATAACGACAGAAGCTAATGAGACATCAAATAATGCTTAG 2094 0.4169 MMECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDITQLLTTIDIYISAENKVSGEMDWYGILGVSPFADEDTVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTSNHVGSKSDAPNANGFYNLKKNVTSNVRTGNNNGRAPSTAVPPSHKKADTFWTICNRCRTHYEYLRIYLNHTLLCPNCNEAFVAVERGPPPNVFKPPNWSSHQQRHQNSQHSTGSNNTNFQWGSHNRMASFGSTDGSTSVAAQAASVVQQASEKVRREGSFHKAEKPMKKRRTDDIRINGYQGYMANHMTGGHGAAGLGSFSESGKANVEAERNHGFSGLPGKHYSTRELSMFEMRNMLMDKSRNEIIKKLQEWKSMAEAKINMDKENKRQKSAFNGKTTGSEKLRGPSVNGNRHPNIDSFPVRSDDTLQKNQAYVTINVPDPDFHNFDLDRDESSFVEDQVWAAYDDDDGMPRYYARIHKVISIKPFKMRISWLNSRSNSELGPMDWVGSGFYKTCGDFRTGKHEISESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRDWSPDWNEHTPDEVIHKYDMVEVLEDFNEEQGIMVTPLVKVAGFRTVFQRHADRVQERRILKEEMFRFSHQVPNYLLTGQEAQNAPKGCRELDPAATPLDLLQITTEANETSNNA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0563 697 MobiDBLite consensus disorder prediction 136 179 - -
Pvu9g0563 697 MobiDBLite consensus disorder prediction 136 184 - -
Pvu9g0563 697 MobiDBLite consensus disorder prediction 234 255 - -
Pvu9g0563 697 Pfam Domain of unknown function (DUF3444) 457 663 IPR024593 -
Pvu9g0563 697 Gene3D DnaJ domain 64 175 IPR036869 -
Pvu9g0563 697 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Pvu9g0563 697 MobiDBLite consensus disorder prediction 410 444 - -
Pvu9g0563 697 MobiDBLite consensus disorder prediction 237 255 - -
Pvu9g0563 697 CDD DnaJ 67 120 IPR001623 -
Pvu9g0563 697 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pvu9g0563 697 PANTHER HEAT SHOCK PROTEIN-LIKE 2 692 - -
Pvu9g0563 697 MobiDBLite consensus disorder prediction 295 311 - -
Pvu9g0563 697 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pvu9g0563 697 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pvu9g0563 697 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pvu9g0563 697 PANTHER BNAC03G44070D PROTEIN 2 692 - -
Pvu9g0563 697 SMART dnaj_3 66 123 IPR001623 -
Pvu9g0563 697 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Pvu9g0563 697 MobiDBLite consensus disorder prediction 291 311 - -
Pvu9g0563 697 MobiDBLite consensus disorder prediction 414 444 - -
Pvu9g0563 697 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0563 Pvu-Chr9 10147853 10152663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0563 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.624 1.23e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0563 - - gmx:100814722 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0563 9 10147853 10152663 Pvu9g0563 9 10147853 10152663 ECH