Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0539 ATGGGGAAGAAAGGAGGCAGCTGGTTCTCCTCCGTCAAAAAAGTTTTTAAATCCTCTTCTAAGGACTCGCCGGTGCCGGAGAAGAAGAAAGACAACAAGGAAGGGCAATGGCAGCACGAGGCGCCAGAGGAGGTGTCCTTGGAGCATTTTCCTGCAGAGAGTTCTCCGGATATTACATATGAAGGGAGTGCCACGTCAACACCAGTGACTGAAGATAGAAGCCATGCTATTGCCTTTGCAGCAGCAACTGCTGCCGCTGCCGAAGCCGCAGTAGCAGCTGCTCAAGCAGCCGCTAGAGTTGTGAGATTGGCAGGTTATGGACGGCAATCCACGGAGGAAAGAGCTGTAATACTCATTCAATCGTACTACAGAGGTTACCTAGCTCGGCGTGCATTGCGGGCTTTGAAGGGATTGGTGAGGCTGCAAGCGCTAGTGAGGGGACACAATGTGAGAAAGCAAGCGCAGATGACAATGCGATGCATGCATGCATTAGTCCGAGTACAGGCAAGAGTAAGAGCTCGAAGACTCCAGTTGACTCAAGAGAAGTTTCAGAGAAGAGTTGAGGAACAGGTCCAAAGAGATCTAGAGGAACAAGAACAACCTAAGCTGCTTTTGAGCCCCATCAAAATGTTAGACATGGATACTTGGGACAGCAGGCGCCAAAGTAGCCAACAGATCAAGGAAAATGATTTGAGGAAACATGAAGCTGCAATGAAGAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAGAAGCAATACATGCACATAGACCCAAATGGTGATGATATTGGAAGCTATACGAATGAGCGTGAAAGAGCCCAAATGGATTGGAACTGGTTGGAACGCTGGATGTTATCACAATCACACAACTCAAGGCACTTTGGGCCACGGGAGAACCTTTATAGAACTCTTGCTACCACAGCTTCCACCACTGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGCTGCAACACTGGACTCAGCTCATGCTAACATGGGCCTCATCCACCGAGAATCTTTTGATACAAGCCCAATATCCAATAGGCACCACCAGCGCCACCACAGTGCAGGTGTACCTAGCTACATGGCCCCAACCCAGTCTGCAAAGGCCAAGGCTCGTAGTCAAGGCCCGTTTAAGCATAGGGGTTCACCTGGGCCTCACTGGAACTCGTCCACGAGGAGAAGTTCTATGGGGCTACCCTGTGACTCATCTAGCTCTGGTGGGCCCACTGCAGCTCATGTGTTCCCAAGAAGTCCAAGCCCAAATATTAATGAAATTCGCCTCCAATCTAGACGGATTTCAGGTGGCAGCCCGGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAACCAATGGTTGGACGTGA 1386 0.4986 MGKKGGSWFSSVKKVFKSSSKDSPVPEKKKDNKEGQWQHEAPEEVSLEHFPAESSPDITYEGSATSTPVTEDRSHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSTEERAVILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTQEKFQRRVEEQVQRDLEEQEQPKLLLSPIKMLDMDTWDSRRQSSQQIKENDLRKHEAAMKRERALAYAFNCQQKQYMHIDPNGDDIGSYTNERERAQMDWNWLERWMLSQSHNSRHFGPRENLYRTLATTASTTDDMSEEKTVEMDMAATLDSAHANMGLIHRESFDTSPISNRHHQRHHSAGVPSYMAPTQSAKAKARSQGPFKHRGSPGPHWNSSTRRSSMGLPCDSSSSGGPTAAHVFPRSPSPNINEIRLQSRRISGGSPDNVHIEDWALPLGTNGWT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0539 461 MobiDBLite consensus disorder prediction 390 416 - -
Pvu9g0539 461 MobiDBLite consensus disorder prediction 377 427 - -
Pvu9g0539 461 Gene3D - 111 154 - -
Pvu9g0539 461 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Pvu9g0539 461 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Pvu9g0539 461 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Pvu9g0539 461 MobiDBLite consensus disorder prediction 20 47 - -
Pvu9g0539 461 PANTHER IQ-DOMAIN 5-RELATED 1 427 - -
Pvu9g0539 461 MobiDBLite consensus disorder prediction 15 67 - -
Pvu9g0539 461 PANTHER IQ-DOMAIN 21 1 427 - -
Pvu9g0539 461 SMART iq_5 111 133 IPR000048 GO:0005515
Pvu9g0539 461 SMART iq_5 134 155 IPR000048 GO:0005515
Pvu9g0539 461 Pfam Protein of unknown function (DUF4005) 348 413 IPR025064 -
Pvu9g0539 461 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0539 Pvu-Chr9 9788034 9792162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0539 1 426 IQD Protein Family AT3G49260 50.221 1.19e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0539 - - gmx:100808965 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0539 9 9788034 9792162 Pvu9g0539 9 9788034 9792162 ECH