Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0533 ATGGACTTTGTCTCCGAACGTGATTTCCCAAATCTTGAGATCATTCCTCATACCTTCAACTCATGCTTTTTCTCTGCTCAACTATACCCCACGGACAAAACCATGGAGGTTTCACTTTCACCACTCGAGGGTTTTTCCGACCACGATTGGACACAGCAGTTGTCATATTCAAGCAAGCAACTAAGCTTGAATGAGTTCCCAGATTTGGAAAACCTGGACATCGATTTTAGCCTCCCACCCCTGGGTGAAGATTTGGAGGAGGTGGACCAGAAGCCCTTGAACATTATTGTTGTTCCTGAAAACGGTCGTTGCAGTCGCGAGAAGGGTTTTGGGGATGCTTTATTGGCGATTGAAAGTGGGTCTGCCATTTGTGTGAAGAAAGAGGAGGTGCAGAATATTGAGCAGATGCTAGTGCCTAGAGCTAGAGGTAGAGGTAGTGGTAGTAGCGGTAGCAGTAAGAAGAAGAAGCCATGTGCTTTGGAATTTGAGGAGATAAAGAAACATTTTGATGTTCCCATTAATGAAGCTGCGAAGCAAATGAATGTGGGGTTAACCATGTTGAAAAGAAGGTGCAGGGAGCTTAACATCATGAGGTGGCCCCATAGGAAACTCAAGAGCTTGCAATTACTCATTGACAATGTTAAGGAATTGGGTTTGGCAGAGGAGGTGTCCATGTTGGAGAAGCATAAAAGGTTGTTGGAGAAATTACCAGGACTGGAAATAAGTGCAAAAGCCAAGAAGCTGAGGCAAGCTTGTTTCAAAGCTAATTACAAGAGGAGAAGGTATATGGGTATGGCAGTCCAAGCTTGA 810 0.4457 MDFVSERDFPNLEIIPHTFNSCFFSAQLYPTDKTMEVSLSPLEGFSDHDWTQQLSYSSKQLSLNEFPDLENLDIDFSLPPLGEDLEEVDQKPLNIIVVPENGRCSREKGFGDALLAIESGSAICVKKEEVQNIEQMLVPRARGRGSGSSGSSKKKKPCALEFEEIKKHFDVPINEAAKQMNVGLTMLKRRCRELNIMRWPHRKLKSLQLLIDNVKELGLAEEVSMLEKHKRLLEKLPGLEISAKAKKLRQACFKANYKRRRYMGMAVQA* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0533 269 PANTHER PROTEIN RKD4 141 261 IPR044607 GO:0003700
Pvu9g0533 269 PANTHER PROTEIN RKD4 141 261 - -
Pvu9g0533 269 Pfam RWP-RK domain 160 207 IPR003035 -
Pvu9g0533 269 ProSiteProfiles RWP-RK domain profile. 142 228 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0533 Pvu-Chr9 9708031 9709636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0533 160 264 AtRKD Transcription Factor Family AT5G53040 63.810 1.65e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pvu9g0533 RWP-RK 6.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0533 - - pvu:PHAVU_009G051600g 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0533 9 9708031 9709636 Pvu9g0533 9 9708031 9709636 ECH