Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0525 ATGGCCCTGTCAACTCCACACATGCAAAGATTCCTCTTATGCAAGCTCCATACTCGCTCCACCTCTAAGACCACACACAAAAACACCTTCACCACCACCACCAGGGGCCGGTGCTGCTCTGCCATAGCCATCGATGCTCCATCGTCTTTGACTGAGGTGCCCGGTGTGAGATGGGGGTCCATAGCCTTGCAGGGTCTTCGTGAAGAGATGGAGGACGACATCATTGTTCGACCCGATGGCCTTCAGGGCTTCTCTTTCGCGGCTGTCTTCGATGGCCATGGAGGGTTTTCTTCTGTCGAGTTCCTCAGGGATGAGCTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGATTACTATTAGTGCAGAAAGATTTCAAAGCCGCTAAAGGAGCATTGCAGGAGGCATTTCTCAAGGCAGACACGAGGTTACTAAAACGGCTTGAAATGAATGGAGAGGAGGATGAATCAGGTGCTACAGCAACTGCCGTTTTCATCGGAGGTGATGAGCTTCTAATTTCACACATCGGTGACTCCTCAGCGGTTCTATGCAGATCTGGAAAAGCAGAAGTTCTGACTAGTCCTCACCGTCCATATGGGAGCAACAAAACTTCTCTTAATGAAATTAGAAGAATCAGAGAAGCAGGTGGATGGATTAGCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACGAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAAATGGTCAGCAAAGTTCATCTCTCGTGTACAGCTCAACAATGACTTGGTTGTAGCATACCCTGATATTTATCAGGTAGCTCTTGGCTCTGATGCAGAATTTATAGTATTAGCAACCGATGGCTTATGGGATTACATCAGCAGCTCAGAAGCAGTTTCTTTAGTTAGGGATCAACTACGAAAACATGGAAACATTCAGCTAGCATGTGAATCGCTTGCAGAAGCCGCTTTGGATAATGTCAGCATTATAATTGCCGATTTAGGGCGGACAGACTGGCTGAATGTGCCACTGGAGCAACAAAATTCTATAGTTGAGCTGGTTCAAGCTCTTGCTACCATTGGAATTGTGTCTTTTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1146 0.4616 MALSTPHMQRFLLCKLHTRSTSKTTHKNTFTTTTRGRCCSAIAIDAPSSLTEVPGVRWGSIALQGLREEMEDDIIVRPDGLQGFSFAAVFDGHGGFSSVEFLRDELYKECVEALQGGLLLVQKDFKAAKGALQEAFLKADTRLLKRLEMNGEEDESGATATAVFIGGDELLISHIGDSSAVLCRSGKAEVLTSPHRPYGSNKTSLNEIRRIREAGGWISNGRICGDIAVSRAFGDMRFKTKKNEMLQKGVQEGKWSAKFISRVQLNNDLVVAYPDIYQVALGSDAEFIVLATDGLWDYISSSEAVSLVRDQLRKHGNIQLACESLAEAALDNVSIIIADLGRTDWLNVPLEQQNSIVELVQALATIGIVSFGIWFSSQLSL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0525 381 ProSiteProfiles PPM-type phosphatase domain profile. 57 340 IPR001932 -
Pvu9g0525 381 Gene3D - 56 345 IPR036457 -
Pvu9g0525 381 Pfam Protein phosphatase 2C 59 332 IPR001932 -
Pvu9g0525 381 SUPERFAMILY PP2C-like 49 341 IPR036457 -
Pvu9g0525 381 CDD PP2Cc 64 340 IPR001932 -
Pvu9g0525 381 PANTHER PROTEIN PHOSPHATASE 2C 57 7 377 - -
Pvu9g0525 381 PANTHER PROTEIN PHOSPHATASE 2C 7 377 IPR015655 GO:0004722|GO:0006470
Pvu9g0525 381 SMART PP2C_4 47 338 IPR001932 -
Pvu9g0525 381 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0525 Pvu-Chr9 9594653 9598970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0525 1 322 PP2C-type Phosphatase Gene Family AT4G27800 61.846 4.39e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0525 K04457 - vra:106776113 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0525 9 9594653 9598970 Pvu9g0525 9 9594653 9598970 ECH
Pvu9g0525 9 9594653 9598970 Pvu1g0184 1 1530981 1533040 PCT