Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0516 ATGGGGATCCTCACCGATCATCATACCACTCCAAAACAACACCACCACCATCATCATTACCACATAAGCTTTCACTTGCACATTCCTCACCTCCACTTTCACCACCAGGAGAAGAAGGACCCGAAGGACGTGCCGAAAGGGTGTTTGGCGATCTTGGTAGGGCAAGGGGAGGAGCAACAGAGGTTTGTGGTTCCGGTCATGTACATGAACCACCCACTGTTCATGAAGTTGCTGAAAGAAGCTGAAGATGAATACGGGTTCCAGCAGAAAGGCCCCATCACCATCCCTTGCCACGTCGAGCACTTCCGCACCGTCCAAGGCATCATCGACAGGGAGAACTGCCTCCACCATCACCATGCTTGGTGCTTCAAAGTTTGA 378 0.5185 MGILTDHHTTPKQHHHHHHYHISFHLHIPHLHFHHQEKKDPKDVPKGCLAILVGQGEEQQRFVVPVMYMNHPLFMKLLKEAEDEYGFQQKGPITIPCHVEHFRTVQGIIDRENCLHHHHAWCFKV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0516 125 Pfam Auxin responsive protein 36 105 IPR003676 GO:0009733
Pvu9g0516 125 PANTHER SMALL AUXIN-UP RNA-RELATED 33 120 - -
Pvu9g0516 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0516 Pvu-Chr9 9422743 9423661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0516 36 103 Calmodulin-binding Proteins AT5G20810 51.471 3.20e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0516 K14488 - gmx:100526867 190.66