Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0504 ATGGGAGGTTCATCGGAGACGAAGTTCCTGCAAGACCTGTTGTTGTACGCTGCGAGCGCGGCGTTAAGTTGCTTGGTTTTGTTCGCGGGGCTCAGACACCTCGATCCTAATCGCGAAGCTTCCAAAAAGGTTCTTGAACACAAGAAAGAGATTGCAAAGCGTCTCGGTCGCCCCCTCATTCAGACTAACCCTTATGAGGATGTTATAGCCTGCGATGTTATAAATCCTGACCACATTGATGTGGAGTTCAACTCTATTGGGGGACTGGAAACAATCAAGCAAGCTTTATTTGAGCTTGTTATTCTGCCTCTAAAAAGACCGGATTTGTTTTCACATGGTAAGCTTCTTGGACCACAAAAGGGGGTTCTGTTGTATGGACCACCTGGCACTGGAAAAACCATGCTTGCCAAAGCTATTGCTAAGGAGTCGGGAGCAGTTTTTATTAACGTGAGGATATCAAACCTTATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGTGGCTGCGGTATTTAGCCTGGCTTATAAGCTTCAGCCTGCCATCATTTTCATTGATGAAGTAGACAGTTTTTTGGGTCAGCGCCGTACAACAGATCATGAGGCTTTGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGGTTTACTACGGATCAGAATGCTCGAGTTATGGTCCTTGCAGCAACAAACCGTCCTTCAGAACTTGATGAAGCAATACTACGGCGTCTTCCTCAAGCCTTTGAAATCGGAATTCCTGACCAAAGGGAGAGGACTGAAATATTGAAGGTTATCTTAAAGGGTGAGAGGGTTGAAGACAACATAGACTTTGGTCATATAGCTGGCTTGTGTGAGGGTTACACTGGTTCGGATCTATTTGATCTTTGCAAGAAAGCTGCCTATTTTCCTATTAGAGAACTACTGGATGAAGAGAAAAAAGGAAAACGAACTCCTGCACCTAGACCTTTGTCCCAGTTAGATTTGGAGAAGGCCCTTGCCACTTCACAGAAGACAAAGGTTGCTGCAAGTGAATACGCTGGATTCAGCCTTCAGTCACCTTCAAGATGGTCGGTGCCTGGTGAGTCAGACTAA 1092 0.4542 MGGSSETKFLQDLLLYAASAALSCLVLFAGLRHLDPNREASKKVLEHKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDVEFNSIGGLETIKQALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERTEILKVILKGERVEDNIDFGHIAGLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGKRTPAPRPLSQLDLEKALATSQKTKVAASEYAGFSLQSPSRWSVPGESD* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0504 363 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 3 342 - -
Pvu9g0504 363 CDD AAA 116 251 - -
Pvu9g0504 363 Gene3D - 253 333 - -
Pvu9g0504 363 Pfam AAA+ lid domain 274 310 IPR041569 -
Pvu9g0504 363 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Pvu9g0504 363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 312 IPR027417 -
Pvu9g0504 363 SMART AAA_5 118 254 IPR003593 -
Pvu9g0504 363 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Pvu9g0504 363 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 342 - -
Pvu9g0504 363 Gene3D - 80 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0504 Pvu-Chr9 9264681 9273021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0504 39 318 Calmodulin-binding Proteins AT3G56690 32.394 1.11e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0504 K22530 - gmx:100796908 687.182