Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0487 ATGGGTGAGTTTGGTCTTTCCCACACGAGAAAAAGAAGCAGCAGCAGCAACAACAGTGGTGGTAGCGTTGTTGGGTTGGATGTGAAACTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACCCTCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGGGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTCCTCATCCATACTTCACTCACATCCTCTTCTCGCTCTGTCTGCATGGATGGTGGTTTCAATCTGAGGTTGGCTAGTAGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGCAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGCGAACGCCACATGCATAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCACCACTCCCACTAGCATCAACAACAATAGCCACCAAATCAAGAGGCCTCGCCATGAGTCTAATCCTTTTCCTTCTATACCTGATGTTACCGTGGCTATTTCTAACCCCACATCTAGAAAACATGGATCTTCACCCCATTTTCTTGGCTCTTCCACCACTCCGCCATACCTTGAATCTCCCCTCTCTCTTGCTAACTTTAGTCTCAAAGCTGCAAATTTTGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCTGACTCAGAATGGCAGTCTCTGATGCATAACAAAGTTGGGCTGAGCAGCGAGAGTTGTTGTAATAACACCCAGCCTCAATTTCTGAATTCATTTGCACTATACAACACTGGACTGGATCAGCAAAACAGACGCCATCCTTTCCTCAATCCTCTGATTGTCCCCATGGAAAATCTCCAACCAGAGAAGACAAGGGGTTTCATTGATGCTTGGTCCAACACAGAAACTGGTGAAAACAATGCCGCCACCACCAACAATAACAACAAGAACTCTGCTGTATCAATTGGTAAATTATCCCTTTCTTCTCTTGATCTATCAAAGGGGGGTGGTGCTGTGAATGAAGATTTAGGTAATGTTAACATAGGGTTGGGCCTAATGGAGTCTATTGCAAACACACACACTGATACCAAAATCTCTCTCTCAAACTGGCTCAACCCAGCACCTTGGGTGGCTTCAACGCTTGGGGGTCCTCTAGCTGAAGTTCTTAGGTCAAGCACAGTCACTGCCACCACCAAAACCAACGAAGCAACCTCCAACACACCCTCACCAGCCACTACACATGTTGAATCTAACAGTCCTCTGGGAACAATGGTGTCATCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCCGATAGCAGTAGCAATAGCAGCCCAACGGTTGCATCATCAAGGGCCAATTCTGAGATGACCTTGCTCAGGTTTCAACCAAATGTAAATTAA 1758 0.4681 MGEFGLSHTRKRSSSSNNSGGSVVGLDVKLQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKPSGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIHTSLTSSSRSVCMDGGFNLRLASSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTTTPTSINNNSHQIKRPRHESNPFPSIPDVTVAISNPTSRKHGSSPHFLGSSTTPPYLESPLSLANFSLKAANFDSMASVSANKEPRGLEWMLNGDPISLGASDSEWQSLMHNKVGLSSESCCNNTQPQFLNSFALYNTGLDQQNRRHPFLNPLIVPMENLQPEKTRGFIDAWSNTETGENNAATTNNNNKNSAVSIGKLSLSSLDLSKGGGAVNEDLGNVNIGLGLMESIANTHTDTKISLSNWLNPAPWVASTLGGPLAEVLRSSTVTATTKTNEATSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPTVASSRANSEMTLLRFQPNVN* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0487 585 MobiDBLite consensus disorder prediction 237 253 - -
Pvu9g0487 585 PANTHER GROWTH-REGULATING FACTOR 7 101 572 - -
Pvu9g0487 585 MobiDBLite consensus disorder prediction 1 25 - -
Pvu9g0487 585 PANTHER - 101 572 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pvu9g0487 585 ProSiteProfiles QLQ domain profile. 137 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu9g0487 585 Pfam WRC 195 237 IPR014977 -
Pvu9g0487 585 ProSiteProfiles WRC domain profile. 194 238 IPR014977 -
Pvu9g0487 585 MobiDBLite consensus disorder prediction 8 25 - -
Pvu9g0487 585 MobiDBLite consensus disorder prediction 512 585 - -
Pvu9g0487 585 MobiDBLite consensus disorder prediction 226 268 - -
Pvu9g0487 585 SMART QLQ_2 136 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pvu9g0487 585 Pfam QLQ 137 167 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0487 Pvu-Chr9 8943875 8947363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0487 403 561 GRF Transcription Factor Family AT5G53660 34.503 9.80e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pvu9g0487 WRC 6.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0487 - - gmx:100803096 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0487 9 8943875 8947363 Pvu9g0487 9 8943875 8947363 ECH