Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0486 ATGATCAACATTCCACTTCTCTTGCTCTCTTCTTTCCTATTTCATCATTTCCATGCCATCTCATGCAACACTAACACAGACACAGATGTCCTTCTTTCTTTCAAATCTCAAGTCACTGACCCAAAAAATGCTCTCTCTGGGTGGTCTGCACACTCCAACCACTGCAACTGGTATGGTGTCACATGCACCAAAGTGGGAAATAGGATCCAATCTCTCAATCTACCAGGACTTTCTCTCTCTGCCAAACTATCTCCTCACCTTTCCAACCTCACTTTCCTACAATCACTTGACCTTTCCAACAACAACTTTCATGGCCAAATTCCCAAAGACTTTGCCCATCTCTCACTTCTCAGTGTCATTAGATTACCTTCAAACAATCTCAGTGGTACACTTCCACCACAGCTAGGCCATCTCCACCGTCTAAAATTTTTGGACTTTTCAGTCAATAAAATCACAGGTCAGATTCCTCAATCATTTGGCAATCTATCTTCTCTTGAGAATCTTTCCTTGGCAGGGAACGGTTTGGAGGGTGAGATTCCAACTGAACTTGGTAATCTTGCCAATCTTTCCGTTCTTCAATTGTCAGTAAACAATTTCTCTGGCAAGTTTCCCACTTCTATCTTCAACATTTCTTCATTAGTCTTTTTATCCGTGACTGGCAACCATCTTACGGGTAAGTTACCACAAAATCTTGGCCATTTTCTTCCAAATTTAGAAAATCTAATCCTTGCAACCAATATGTTTGAAGGGGTAATTCCGAATTCCATATCCAATGCCTCACATCTTCGACAGATTGACCTTGCTAACAATAAATTTACTGGATCCATACCTCTATTCTACAACTTAAAAAACCTTACCCGCCTCAGTCTTGGTAATAATAGTCTCTCTTCCACAACCTCTTCAAATTTCCAGTTCTTTAATTCCCTTAGAAACTCCACCCAGTTACAAATTCTCATGATCAATGATAACCATTTGGCTGGGGACCTTCCAAGCTCTGTTGCTAATCTTTCCCGGAATCTCCAACAAATCTGTGTAGCTAATAATTTTCTTACTGGTACCATTCCTCAAGGAATGAACAAATTCCAAAATCTCATATCCTTTTCTTTTGAAATCAATTATTTCGTTGGAGAGTTACCACAAGAATTAGGGGCACTAAATAATCTACAGAATCTTAGGATAGACAGCAACAGATTCTCTGGGGAAATTCCAGACATTTTTGGCAATCTCACAAATCTGAATACCCTTGCAATGGGCAATAACCAGCTCTCGGGTAGAATTCACCAAAGTATTGGACAATGCACGAGATTAAGTACTCTTGACTTGGGAATGAATAGACTTGGTGGGACCATACCGAAGGAGATTTTTCAGCCTTCTGGCTTAAGAATCTTGTATTTAGCAGGAAACTCTTTGCAGGGTCCGCTTCCTCCTAAGGTCGGCACCATGAAACAGCTTGAGACCATGAATATTTCTGACAACGAGATGTCAGGGAACATTCCTGTGGAAATAGGAGAGTGTTTTGGTTTGAAGTGGCTAATGATGTCAAGAAACAAATTCAATGGTTCAATCCCAACTAAAATTGGGAATTTAGCATCCCTTGAGACTTTGGATTTATCATTAAACAGTCTCACTGGTGCTATTCCTGAAAGTTTAGAAAAGCTCGAGTATATACAGAAATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCTGATAAAGGTCTTTTTACGAACCTTACCAAATTTGATCTTCGAGGTAACAATCAACTCTGTAGCGTTAACAAGGAAATTGTGCAAAATTTGGGAGTACTCCTGTGTGTTGTTGGAAAAAAGAAAAGAAAAATCTTACTCCCTACCATACTTGCAGTAGTTGGAACCACTGCTTTGTTCATTTCAATGCTCTTTCTGTTTTGGACAATGAAGAAGAAAAGAAAGGAGAGGAAAACCAGTGTGTCATCTGAACCTTTCCGGGGGTTCCCTCAAAATATAACTTATGGTGACATTCGGATAGCTACAGACAATTTTGCAGCTGAAAACTTAATTGGAAAAGGAGCTTTTGCCTCTGTGTACAAGGGTGTGTTCAGCTTCAGCGCTGGTGAAACCGTCACCCTTGCTGTCAAAGTCCTGGACCTGCAACAAAGCAAAGCGTCTAAGAGTTTCAATGCGGAATGTGAAGCTTTGAAAAATGTTAGGCATCGGAACCTGGTGAAGGTTATCACTTCTTGCTCCAGCCTTGATTATAATGGGGAGGAATTTAAGGCCCTTGTCATGCAATTCATGCCCAATGGAAACTTGGACATGAAAATACACCCAGGAGATGAAGAGCCAGGATCCATTCTAACCTTGATGCAAAGATTGAGCATTGCCATTGATGTTGCTTCTGCTGTGGAGTACTTGCACCATGATTGTCATCCACCAATAGCTCATTGTGATCTGAAACCTGCCAATGTCCTTCTAGATGAAAACATGACTGCCCGTGTTGTAGATTTTGGATTGGCAAGGTTTCTGTGTCAAAACACATCAGAGAAGCAGAGTAGCACTCTAGCACTGAAAGGATCAATTGGCTACATTGCCCCAGAATATGGTTTTGGAAGCAAGGCTTCAACTGAGGGCGATGTGTACAGTTTTGGGATCCTAGTGCTAGAGATGTTCACAGGAAAAAGACCAACTGATGAAATGTTCAAGGAAGGATTAAGCCTCAGGAAATTTGTCTCAGCTATGGATGAGAATGAAGTAGTGATGATGGGTGGTGATAGAAGGCTGATTGAGGATTATGGATATTCAACACAAAGCTCAATCAGTGATGATCATAGCAGTGGCTTTGACAGCAACACACATTGTATGCTTAAAGCTGAGGAGTGCATCGCTGATGTGATAAGAGTTGGTCTGAGTTGCACAGCTTATCAACCCAAAGACCGATGGAGCATGAGAGAGGCCTTATCAAAATTGCAAGCTATCAACCACTCTATGCTGCCTTTTTGA 2982 0.4101 MINIPLLLLSSFLFHHFHAISCNTNTDTDVLLSFKSQVTDPKNALSGWSAHSNHCNWYGVTCTKVGNRIQSLNLPGLSLSAKLSPHLSNLTFLQSLDLSNNNFHGQIPKDFAHLSLLSVIRLPSNNLSGTLPPQLGHLHRLKFLDFSVNKITGQIPQSFGNLSSLENLSLAGNGLEGEIPTELGNLANLSVLQLSVNNFSGKFPTSIFNISSLVFLSVTGNHLTGKLPQNLGHFLPNLENLILATNMFEGVIPNSISNASHLRQIDLANNKFTGSIPLFYNLKNLTRLSLGNNSLSSTTSSNFQFFNSLRNSTQLQILMINDNHLAGDLPSSVANLSRNLQQICVANNFLTGTIPQGMNKFQNLISFSFEINYFVGELPQELGALNNLQNLRIDSNRFSGEIPDIFGNLTNLNTLAMGNNQLSGRIHQSIGQCTRLSTLDLGMNRLGGTIPKEIFQPSGLRILYLAGNSLQGPLPPKVGTMKQLETMNISDNEMSGNIPVEIGECFGLKWLMMSRNKFNGSIPTKIGNLASLETLDLSLNSLTGAIPESLEKLEYIQKLNLSFNHLEGEVPDKGLFTNLTKFDLRGNNQLCSVNKEIVQNLGVLLCVVGKKKRKILLPTILAVVGTTALFISMLFLFWTMKKKRKERKTSVSSEPFRGFPQNITYGDIRIATDNFAAENLIGKGAFASVYKGVFSFSAGETVTLAVKVLDLQQSKASKSFNAECEALKNVRHRNLVKVITSCSSLDYNGEEFKALVMQFMPNGNLDMKIHPGDEEPGSILTLMQRLSIAIDVASAVEYLHHDCHPPIAHCDLKPANVLLDENMTARVVDFGLARFLCQNTSEKQSSTLALKGSIGYIAPEYGFGSKASTEGDVYSFGILVLEMFTGKRPTDEMFKEGLSLRKFVSAMDENEVVMMGGDRRLIEDYGYSTQSSISDDHSSGFDSNTHCMLKAEECIADVIRVGLSCTAYQPKDRWSMREALSKLQAINHSMLPF* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0486 993 Gene3D Ribonuclease Inhibitor 279 599 IPR032675 -
Pvu9g0486 993 ProSiteProfiles Protein kinase domain profile. 675 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0486 993 ProSitePatterns Protein kinases ATP-binding region signature. 681 707 IPR017441 GO:0005524
Pvu9g0486 993 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Pvu9g0486 993 PANTHER RECEPTOR-LIKE PROTEIN 55 1 88 - -
Pvu9g0486 993 PANTHER RECEPTOR-LIKE PROTEIN 55 160 983 - -
Pvu9g0486 993 PANTHER RECEPTOR-LIKE PROTEIN 55 88 162 - -
Pvu9g0486 993 Gene3D Ribonuclease Inhibitor 173 278 IPR032675 -
Pvu9g0486 993 SMART LRR_sd22_2 282 305 - -
Pvu9g0486 993 SMART LRR_sd22_2 138 170 - -
Pvu9g0486 993 SMART LRR_sd22_2 529 558 - -
Pvu9g0486 993 SUPERFAMILY Protein kinase-like (PK-like) 649 984 IPR011009 -
Pvu9g0486 993 Gene3D Ribonuclease Inhibitor 23 172 IPR032675 -
Pvu9g0486 993 SUPERFAMILY RNI-like 71 399 - -
Pvu9g0486 993 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 88 - -
Pvu9g0486 993 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 88 162 - -
Pvu9g0486 993 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 160 983 - -
Pvu9g0486 993 SMART LRR_typ_2 90 113 IPR003591 -
Pvu9g0486 993 SMART LRR_typ_2 409 433 IPR003591 -
Pvu9g0486 993 SMART LRR_typ_2 385 408 IPR003591 -
Pvu9g0486 993 SMART LRR_typ_2 529 553 IPR003591 -
Pvu9g0486 993 SMART LRR_typ_2 138 161 IPR003591 -
Pvu9g0486 993 SMART LRR_typ_2 235 258 IPR003591 -
Pvu9g0486 993 SMART LRR_typ_2 282 305 IPR003591 -
Pvu9g0486 993 SMART LRR_typ_2 434 457 IPR003591 -
Pvu9g0486 993 SMART LRR_typ_2 162 186 IPR003591 -
Pvu9g0486 993 Gene3D Transferase(Phosphotransferase) domain 1 760 991 - -
Pvu9g0486 993 SUPERFAMILY L domain-like 338 594 - -
Pvu9g0486 993 SMART serkin_6 675 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0486 993 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Pvu9g0486 993 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Pvu9g0486 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Pvu9g0486 993 Gene3D Phosphorylase Kinase; domain 1 658 759 - -
Pvu9g0486 993 Pfam Protein tyrosine and serine/threonine kinase 678 979 IPR001245 GO:0004672|GO:0006468
Pvu9g0486 993 Pfam Leucine Rich Repeat 93 114 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0486 Pvu-Chr9 8937853 8941096 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0486 26 986 Receptor kinase-like Gene Family AT3G47570 41.842 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu9g0486 PK_Tyr_Ser-Thr 8.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0486 - - gmx:100802571 1437.94