Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0483 ATGATGGGCTTCATTCGATTCATTTTGATCTTATGTTTCCTCCTTCCTCATTTTCATGACATCCTATGCAACATTGATTCAGACAGAGATGCCCTTCTTTCTTTCAAATCCCAATTGAGAGATCCAAAGAATTACCTGTCTAGTTGGACTTCAGGTTCCAATCCCTGCATCTGGAACGGTGTCACCTGCTCCGAAGTTGGAGAGAGGGTCCAATATCTCGCTCTATCAGAACTTCACCTTTCTGGCAAACTACCTGCTCGGCTTTCCAACCTCACTTACCTTAATTCGCTCGACCTTTCCGGCAACAATCTTCATGGTGAAATTCCCCACGAGTTGGGTCATCTCCAACGTCTACAAAATTTAGACTTGTCAAACAATAAGCTCACAGGTAAAGTACCTCCATCATTAGGTAACCTCTTTTCTATGAAGAGTCTTGTCCTGGCAAGGAATCGCTTTGAGGGTGAGATTCCAACTGAACTCGGTAATCTCTCTAGTCTTTCCTACCTAGCACTTTCAGACAACTACTTCTCTGGGGAGCTTCCAAGCTCTTTAGTGAATATGTCTAGCGATCTCAAACTATTCCATGTTGGACATAACTGGTTAACCGGCAACATTCCACCAGGAATTAAGAAATTTCAAAATCTCCTCTCCTTGTCCTTTGAAAATAATTTTTTCAGTGGAGAGTTACCATCAGAAATGGGAGCTCTACAGAGGCTGCAGAATATTGACATACACGGGAACAGATTGTCCGGGCAAATTTCAGACATTTTTTGCAATATAACAAATCTGTATACCCTTGCAATGGGAAATAATCAGTTCTCGGGAAGAATTCCCACAAGTATTAGACAATGCAAGGTGTTATTTTCTCTTGACTTGAGAATGAATAGGCTTAGAGGGACCATACCAAAGGAGATCTTTCAGCTTTCTTATTTAACATCCTTGAATTTAGCAGGAAATTCCTTGCATGGTTCGCTTCCTCCCGAGGTCGGCACCATGACACAACTTGAGACCTTGGATTTATCATCAAACAATCTCGTTGGCCCTATTCCGGTAAGTTTAGAAAACCTCCATTATCTACAGAAATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCTGTGAAAGGTCTGTTTACGAACCTTACCAAATTTGATCTTCGAGGTAACAATCAACTATGTAGCCTTAACAAGGAAATTGTGCAAAATTCGGGAGTACTCCGGTGTGTTGTTGGAAAAAAGAAAAGAAAAATCTTACTCCCTATCATACTTGCAGTAGTTGGTGCTACTGCTTTGTTCATTTCAATGCTCTTTCTGTTTTGGACAATAAAGAAGGAAAGAAAGGAGAGGAAAACCAGTGTGTCATCTGAACCTTTCAGGGGGTTGCCTCAAAATATAACTTACGGTGACATTCGGAGAGCTACAGACAATTTTGCAGCTGAAAACTTAATTGGAAAAGGAGTTTTTGGCTCTGTGTACAAGGGTGTGTTCAGCTTAAGCGCTGGGGAAACCGCCACCCTTGCTGTCAAAGTCCTGGACCTGCAACAAAGCAAAGCGTCTAAGAGTTTTAATGCGGAATGTGAAGCTTTGAAAAATGTTAGGCATCGGAACTTGGTGAAGGTTATCACTTCTTGCTCCAGCCTTGATTATAATGGGGAGGAATTTAAGGCCCTTGTCATGCAATTCATGCCCAATGGAAACTTGGACTTGAAAATACACACAGGAGATGAAGAGTCAGGATCCATTCTAACCTTGATGCAAAGATTGAGCATTGCCATTGATGTTGCTTCAGCTGTGGAGTACTTGCACCATGACTGTCATTCACCAATAGCTCATTGTGATCTGAAACCTGCCAATGTCCTTCTAGATGAAAACATGACTGCACATGTTGTAGATTTTGGATTGGCAAGGTTTCTGTCTCGAAACACATCAGAGAAGCAGAGTAGCACTCTAGCACTGAAAGGATCAATTGGCTACATTGCCCCAGAATATGGTTTTGGAAGCAAGGCTTCAACCGAGGGCGATGTGTACAGTTTTGGGATCCTAGTGCTAGAGATGTTCACAGGAAAAAGACCAACTGATGAAATGTTCAAAGAAGGATTAAGCCTCAGCAAATTTGTCTCAGCTATGGATGAGAATGAAGTAGTGATGATGGGTGGTGCTAGAAGGCTGATTGAGGATTATGGATATTCAAAACAAAGCTCAAACAGTGATGATCACAGCAGTGGCTTTGACAGCAACACACATTGGATGCGTAAAGCTGAGGAGTGCATCGCTGATGTGATAAGAGTTGGTCTGAGTTGCACAGCTTATCAACCCAAAGAACGATGGAGCATGAGAGAGGCCTTATCAAAATTGCAAGCCATTAACCACTCTATGCTGCCTTTTTGA 2391 0.4203 MMGFIRFILILCFLLPHFHDILCNIDSDRDALLSFKSQLRDPKNYLSSWTSGSNPCIWNGVTCSEVGERVQYLALSELHLSGKLPARLSNLTYLNSLDLSGNNLHGEIPHELGHLQRLQNLDLSNNKLTGKVPPSLGNLFSMKSLVLARNRFEGEIPTELGNLSSLSYLALSDNYFSGELPSSLVNMSSDLKLFHVGHNWLTGNIPPGIKKFQNLLSLSFENNFFSGELPSEMGALQRLQNIDIHGNRLSGQISDIFCNITNLYTLAMGNNQFSGRIPTSIRQCKVLFSLDLRMNRLRGTIPKEIFQLSYLTSLNLAGNSLHGSLPPEVGTMTQLETLDLSSNNLVGPIPVSLENLHYLQKLNLSFNHLEGEVPVKGLFTNLTKFDLRGNNQLCSLNKEIVQNSGVLRCVVGKKKRKILLPIILAVVGATALFISMLFLFWTIKKERKERKTSVSSEPFRGLPQNITYGDIRRATDNFAAENLIGKGVFGSVYKGVFSLSAGETATLAVKVLDLQQSKASKSFNAECEALKNVRHRNLVKVITSCSSLDYNGEEFKALVMQFMPNGNLDLKIHTGDEESGSILTLMQRLSIAIDVASAVEYLHHDCHSPIAHCDLKPANVLLDENMTAHVVDFGLARFLSRNTSEKQSSTLALKGSIGYIAPEYGFGSKASTEGDVYSFGILVLEMFTGKRPTDEMFKEGLSLSKFVSAMDENEVVMMGGARRLIEDYGYSKQSSNSDDHSSGFDSNTHWMRKAEECIADVIRVGLSCTAYQPKERWSMREALSKLQAINHSMLPF* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0483 796 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 80 159 - -
Pvu9g0483 796 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 162 336 - -
Pvu9g0483 796 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 330 786 - -
Pvu9g0483 796 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 89 - -
Pvu9g0483 796 Gene3D Ribonuclease Inhibitor 21 72 IPR032675 -
Pvu9g0483 796 Gene3D Ribonuclease Inhibitor 73 403 IPR032675 -
Pvu9g0483 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Pvu9g0483 796 Pfam Leucine Rich Repeat 117 139 IPR001611 GO:0005515
Pvu9g0483 796 Pfam Leucine rich repeat 310 369 IPR001611 GO:0005515
Pvu9g0483 796 SMART LRR_sd22_2 115 141 - -
Pvu9g0483 796 SMART LRR_sd22_2 379 398 - -
Pvu9g0483 796 SMART LRR_sd22_2 236 262 - -
Pvu9g0483 796 SMART LRR_sd22_2 332 358 - -
Pvu9g0483 796 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pvu9g0483 796 ProSiteProfiles Protein kinase domain profile. 478 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0483 796 PANTHER RECEPTOR-LIKE PROTEIN 55 80 159 - -
Pvu9g0483 796 PANTHER RECEPTOR-LIKE PROTEIN 55 162 336 - -
Pvu9g0483 796 PANTHER RECEPTOR-LIKE PROTEIN 55 2 89 - -
Pvu9g0483 796 PANTHER RECEPTOR-LIKE PROTEIN 55 330 786 - -
Pvu9g0483 796 ProSitePatterns Protein kinases ATP-binding region signature. 484 510 IPR017441 GO:0005524
Pvu9g0483 796 Gene3D Phosphorylase Kinase; domain 1 461 562 - -
Pvu9g0483 796 SMART serkin_6 478 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0483 796 PRINTS Leucine-rich repeat signature 118 131 - -
Pvu9g0483 796 PRINTS Leucine-rich repeat signature 332 345 - -
Pvu9g0483 796 Pfam Protein tyrosine and serine/threonine kinase 481 785 IPR001245 GO:0004672|GO:0006468
Pvu9g0483 796 SUPERFAMILY L domain-like 54 400 - -
Pvu9g0483 796 SUPERFAMILY Protein kinase-like (PK-like) 452 788 IPR011009 -
Pvu9g0483 796 Gene3D Transferase(Phosphotransferase) domain 1 563 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0483 Pvu-Chr9 8887058 8889783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0483 60 789 Receptor kinase-like Gene Family AT3G47570 35.804 1.02e-158 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu9g0483 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0483 - - pvu:PHAVU_009G046600g 1562.36