Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0475 ATGGCTGCTATGGATTCTGGTGTTCAGGGTTGCATCTTATCCGTTTTAATTCTCCACGACGAGGAAATCGCAGTCACGGCTGAGAAGATCAACGCTTTGTTGAAGGCTTCCAATGTCTCCACAGAGTCCTACTGGCCAAGCCTCTTCGCTAAGCTCTCTCAGAATAAGAACATCGAAGACCTCATCTTGAACGCTGGTGGCGGAGGTGCCGCTGTCGCCGTCGCGGCTCCCGCTGCCGGTGGTGCTGGTGCCGCTGCTGCAGCACCTGCTGTTGAGGAAAAGAAGGAAGAAGTGAAGGAAGAAAGTGATGACGACATGGGATTTGGTTTGTTTGATTAG 339 0.5221 MAAMDSGVQGCILSVLILHDEEIAVTAEKINALLKASNVSTESYWPSLFAKLSQNKNIEDLILNAGGGGAAVAVAAPAAGGAGAAAAAPAVEEKKEEVKEESDDDMGFGLFD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0475 112 Hamap 50S ribosomal protein L12 [rpl12]. 9 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pvu9g0475 112 MobiDBLite consensus disorder prediction 87 112 - -
Pvu9g0475 112 MobiDBLite consensus disorder prediction 90 106 - -
Pvu9g0475 112 CDD Ribosomal_P1 9 111 - -
Pvu9g0475 112 Pfam 60s Acidic ribosomal protein 25 111 - -
Pvu9g0475 112 Gene3D - 7 66 IPR038716 -
Pvu9g0475 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 4 112 - -
Pvu9g0475 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 4 112 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0475 4 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 51.327 3.64e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0475 K02942 - gmx:100801741 137.502