Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0469 ATGCTTGGGTGGTTCCGGTGGCATGTTGTCCGTTTTCACCATTGCCACTTCACTAAACAGAAATTGGTATCCTTGGGCGTAGAAGAGATGGTGTTGCCACTTGCTCTGTTTGGTAACTGTTGGTGTTTGTGTTCTTCTACCGTCTTTCATCCATTCCCACCCTTTCGTTATTCTTCAACCTTTCACCCTAAACTTCACCCTCAACCCCAATGCTCCCTCGCCAAAAGCCACGTCAAACCCCAACCATCAAACCGCCACTCCACTCGCCGCAGTCACTGCACCAATTCCCTTCCCATTGCTGATGCTCAAACCGCGTCGTTGTTTTCTCTGTTTCAAGAAATTGGGATTGGCTTTGAGGAAACTCAAGTGCTCTTCTCCAACAACCCTGACCTTACCTCTGTGTCTCTAGAATCATTGCGCTCTCGCCTTCGTTCTCTACGATCTCTCGACTTCGACCCTCTCGCTCTCGGCAAATTAATCACGAAGCGCCCAACTGTCCTAACAGACAACCAAATTGACCCTTTGTTAACCTTCCTCCGAGACGAATTGCAAGGAAAAATCGAGAAACCGCGGCTGAATCGCCTCCTATCTTCTACGGAACAGAAGTTATTGGTGGGTTTTCCTCAGAAGGTTCGATTCCTCGTTGACCGTGGAATCCCCGTTGACCAGGTTGTGCATGTGCTCAACAAAGTGAGTTTGCCAAAGGTCTTCTGTGGCAGGTCGATTGATGAAATTGATAGAACTTTAGCTTTCTTCGAACCCTTTGGTGGCATTGATTTGATTCTTAAACGCCCTCAAATTTTGAACCATGATTTGGATGCTCAAATTATTCCTAGAGTCAATGTTCTGATGGAGCTTAGTGATGGAGATGTGGATAGTGTTGGGAAACTGCTGGTTAGGTTTCCCATTTTTTTGAGCTATAGTGTGGAACATGTGGAGGGACATGTTGGGTTTTTTAGTTCTTTTGTTGAGCTAGATTACAAGCAGATTTTTAGGATAATGCAAGTGTATCCGGCTATTGTTAGTGCTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAGTTTCTCAAGGAATGTGGGTTAGATTCAGATGACATCTTCAAGTTCTTGATTAAAGCGCCCACGTTTCTCAGCACTTCATTCCATGAGAACATTGCATATAAGCTGGTGTTGCTAGTGAAGATTGGGTATAGGTATAGGACAAAGGACTTCGCAGTGGCAGTTAGGTCTGCTAACAGGACAAACAGTGTGAACATGCAGAAGGTGATTGGTATGTTCTTGAATTATGGATTTTCATGTGAAGATATCGTTGCCATGAGCAAGAAGCATCCACAGATACTGCAGTATAATCACGCTTCTTTGGAGATGAAGATGGAGTACTTGATAGAGGAAATGGGGCGTGACATTGAGGAGTTACTGTTTTTTCCTGCATTCCTTGGATATAAGTTAGATGATAGGATTAAGCATAGGTATGAAGTGAAGAAGAGTGTTAGAGGTGCGGGAATGTCTATCAATAAGCTTTTATCTGTTTCCGAGGAGACATTCACTGGCAAACGAAAAAAGGCTCATGCATAG 1575 0.4425 MLGWFRWHVVRFHHCHFTKQKLVSLGVEEMVLPLALFGNCWCLCSSTVFHPFPPFRYSSTFHPKLHPQPQCSLAKSHVKPQPSNRHSTRRSHCTNSLPIADAQTASLFSLFQEIGIGFEETQVLFSNNPDLTSVSLESLRSRLRSLRSLDFDPLALGKLITKRPTVLTDNQIDPLLTFLRDELQGKIEKPRLNRLLSSTEQKLLVGFPQKVRFLVDRGIPVDQVVHVLNKVSLPKVFCGRSIDEIDRTLAFFEPFGGIDLILKRPQILNHDLDAQIIPRVNVLMELSDGDVDSVGKLLVRFPIFLSYSVEHVEGHVGFFSSFVELDYKQIFRIMQVYPAIVSASRERKLRPRIQFLKECGLDSDDIFKFLIKAPTFLSTSFHENIAYKLVLLVKIGYRYRTKDFAVAVRSANRTNSVNMQKVIGMFLNYGFSCEDIVAMSKKHPQILQYNHASLEMKMEYLIEEMGRDIEELLFFPAFLGYKLDDRIKHRYEVKKSVRGAGMSINKLLSVSEETFTGKRKKAHA* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0469 524 MobiDBLite consensus disorder prediction 74 92 - -
Pvu9g0469 524 Gene3D Transcription termination factor 3, mitochondrial 99 290 IPR038538 -
Pvu9g0469 524 Gene3D Transcription termination factor 3, mitochondrial 291 523 IPR038538 -
Pvu9g0469 524 MobiDBLite consensus disorder prediction 72 92 - -
Pvu9g0469 524 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 112 521 - -
Pvu9g0469 524 PANTHER CGI-12 PROTEIN-RELATED 112 521 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 SMART mt_12 122 152 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 SMART mt_12 367 398 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 SMART mt_12 157 186 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 SMART mt_12 331 362 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 SMART mt_12 437 468 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 SMART mt_12 469 501 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 Pfam mTERF 109 389 IPR003690 GO:0003690|GO:0006355
Pvu9g0469 524 Pfam mTERF 349 515 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu9g0469 mTERF 4.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0469 - - pvu:PHAVU_009G045200g 1026.16