Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0462 ATGTTGTCCAGATTCTCAAAAGTTTACAGAGAAGATTTGTGTTCACTGAAGGAAAAGCTTCCTGTCTCAAACAAGAAAAGGAAATATAAAGATGATCTCTTGAATGATGATTTAGAAGATGAAGAAATGCTTATTCTCTTAGGGGCAAAGACCAGGAGAAGATCAAGAAGAATGAATAATGTGAAGAATGTTGAACAAAAGCCCCGAAATTGTCATCAATGCATGAAAAAGGGCAGAAGACTTTTTGTGCGTTGTCCTAAATGCCCGAACATGTACTGTATGCAGTGTATTGATAAATGGTACCCTGATATGAAAATAGAAGAAATTGCTGTAAGTTGTCCGTTTTGCCGGAAAAACTGCAATTGCAATGTTTGCTTGTGCTCAAGAGGAGTGATTAAGACATCTAACAGGGACATAACCGATTATGAAAAGGCTCAGTATCTGCATTATATGATTAACTTACTCCTACCGTTTTTGAAACAAATTTGTCAAGAACAAAATCAAGAGGAGCAGATTGAAGCTAAAATACTAGGAAAGAATTCTTTTGAGAAGGAAATACCTCCAAGTCTTTGTGGCAACGATGAACGTATCTATTGTGATCACTGTGCTACTTCAATTATTGACCTTCATAGAAGCTGCCCCAGTTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATAAGAGATGGAAGCATTACACCCCGGGTCGAGCAGAAGTTCTCATATGTGAATAGGGGCTATGAATATATGCATGGTGGAGACCCTCTACCTGTGTCTAATGATTTCGGAACATCAGAATGTCATACCAAGCTATCTAATGTGTGGAATGCTAAGAGTGATGGAAGCATCCGATGTGCACCAAAGGAGTTCGGCGGTTGTGGTAGTGCTGCATTGGAGCTCAGACGTGTCCTACCAAGTGGGTGGATATCTGAATTGGAAATCAGAACTCGCAGTATGCTGAAAATTTGGGAAAATGTAAACACTACTCTTCAGCAAAAAAAAGCAGTATCAAGATACACCTCTTTGAGAAAGGATGATAATATGTCCTGTTCAGAGTCAAGTAACATTCAAAAGGGAGGATTGTTACTTTTCCAAAAGCATTGGGCTAATGGCGAACCAATTATAGTTCCTGATGCCCTTAAACTGGGCACCGGTCTGAGCTGGAAGCCGATGGTAATGTGGCGAGCATTATGCGAAAATAGGGTTTCAGAGGTCGGTTCAAAAATGTCAGAAGTGAAAGCCATTGATTGCCTGGCTAATTGTGAGGTCGAAATCGATAATCACACATTTTTTAAAGGTTATATAGAGGGAAGAACATACAGAAATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCATCTGATAAATTTGAAGATCTTTTGCCCCGCCATTGTGATGAGTTTATTCGCTCCTTGCCATTCCAAGAGTACAGCGATCCTCGGAGCGGAATTCTCAATCTTGCTGCGAAGTTGCCAGCACATGTCCTAAAACCTGACATGGGTCCGAAAACATATATTGCCTATGGGATTAAAGAAGAGCTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTCAATATTTTGACCCATACAGCAGAGGTGATATTAACTGATGAGCAGCACTTAATTATTTCAAAGTTGAAAGAAGCACACAAGGTACAAGGTGAGAGAGAGCAGTGTGCTCAAGAAAGGGTTTCCAACAGCCTGAATGGCCGACCTTTCAAACACAACAGAGTATGGAGAGAAAATAAGGTAGTTTTAGAATCCAAAGACATAGAGAAGCGCCCTATTGAAATTAATGGAAGGATCTTTCCAAATGATGTACATGAAGGGGTCACGTCTGCTACAGAGAATGAATCAATGAAAACAGGCAGTGCTCTATGGGATATCTTTCGGAGAGAAGATTCTGAGAAGTTAGAAACATATCTTAGAAAGCACTCAAGAGAATTTAGACATACTTATTGTTCTCCCGTTGAACAGGTTGCACATCCAATTCATGACCAATGTTTTTATTTGACATCGGAGCACAAGAAGAAGCTGAAGGAGGAGTTCGATGCGGTATTTATTCCTGCTGGATGCCCACATCAAGTCAGGAATCTCAAGTCATGCACAAAAGTTGCGGTAGACTTTGTGTCTCCAGAAAATATCCATGAGTGTCTGCGTTTAACTAATGAGTTCCGCCAGCTTCCCAAGAACCACAAGGCTAGAGAAGATAAGCTTGAGATAAAGAAGATGATAGTTTATGCCATTGATGAAGCTGTCACAGACCTAAAAGCTTTGCTGAACTTTTCTTGA 2322 0.4065 MLSRFSKVYREDLCSLKEKLPVSNKKRKYKDDLLNDDLEDEEMLILLGAKTRRRSRRMNNVKNVEQKPRNCHQCMKKGRRLFVRCPKCPNMYCMQCIDKWYPDMKIEEIAVSCPFCRKNCNCNVCLCSRGVIKTSNRDITDYEKAQYLHYMINLLLPFLKQICQEQNQEEQIEAKILGKNSFEKEIPPSLCGNDERIYCDHCATSIIDLHRSCPSCSYELCLSCCQEIRDGSITPRVEQKFSYVNRGYEYMHGGDPLPVSNDFGTSECHTKLSNVWNAKSDGSIRCAPKEFGGCGSAALELRRVLPSGWISELEIRTRSMLKIWENVNTTLQQKKAVSRYTSLRKDDNMSCSESSNIQKGGLLLFQKHWANGEPIIVPDALKLGTGLSWKPMVMWRALCENRVSEVGSKMSEVKAIDCLANCEVEIDNHTFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYSDPRSGILNLAAKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVILTDEQHLIISKLKEAHKVQGEREQCAQERVSNSLNGRPFKHNRVWRENKVVLESKDIEKRPIEINGRIFPNDVHEGVTSATENESMKTGSALWDIFRREDSEKLETYLRKHSREFRHTYCSPVEQVAHPIHDQCFYLTSEHKKKLKEEFDAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAIDEAVTDLKALLNFS* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0462 773 SMART cupin_9 464 736 IPR003347 -
Pvu9g0462 773 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 53 771 IPR045109 GO:0032454|GO:0033169
Pvu9g0462 773 SUPERFAMILY Clavaminate synthase-like 364 767 - -
Pvu9g0462 773 Gene3D Cupin 345 745 - -
Pvu9g0462 773 Pfam JmjC domain, hydroxylase 627 719 IPR003347 -
Pvu9g0462 773 ProSiteProfiles Zinc finger RING-type profile. 71 117 IPR001841 -
Pvu9g0462 773 ProSiteProfiles JmjC domain profile. 483 736 IPR003347 -
Pvu9g0462 773 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 53 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0462 Pvu-Chr9 8611569 8615853 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pvu9g0462 JmjC 1.7e-06 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0462 K15601 K21989 gmx:100797860 1218.76