Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0456 ATGTCCTCCGAAGACATCACCCTCGTCCCCGACCAGAGGATCGAGAACGGTCTCACCTCCCCTCTTGTCTTCCAAGACGACCCTCTCCGCTTCAATTGCCCCACACCGCAGCATCGGGTCGGGGACCCGGGTCCCAAAACCCGCGAACTCGGCGCCTTCATCGACGAGAAGATGTTTATCGACCGCGGCCGCTTCTTTGCCGCCCAGAACCCCGACTTCCGTCGCTACGCCGACTGCTCCTCCCGCCAAGACCCCCGCAATTGGACCGTCAACGGCACCGCCGCCACTCCCAGCGGGGACGACGATTCTGACGAGGACGATGAAGATGACGACGAGGACGATGACGACGAAGGCGATACCGAAGTTGAAGGACTCGTTGGTGGTGGAAGCAAAAGCGAAATTATCGCTAACAACAACGGTAGCGGTAGTAATTTGCCTTCTGTTACAAACGGGAAAGCTCATACTTTTGTTTCTGGGAGAGATCTGTTGGGGAAGGATGGTGGAGAGATTGGGCAGTTGGTGCTTAGCAATATGAGTGGTGGTGGTGATGAAGATCAACGGCAAGAGGGGTTAGGTAAGTCTCAGAATTCTGTTACCGTTGCTGAAACTGACTGTGAGGAGTACTATTCGCATTATCTTCAAGGTGCTGACGGGGCTTCTGGCCACAAAGTTATGGTGGATAGTGGTTGTGGGTTTAGTGGGCGAAAGGATGCGATGTATTCCACCGAGTCAGGGGAATCACTCAGAAATATTCTTTCAGATCCCGTTACTGGAGCTCTTATGGATGACGCTATGATATTACCGTGTGGACATTCATTTAGCGGAAGTGGAATACAGCATGTTATTAGAATGAAAGCTTGCTGCACCTGTTCTCAACCCATAACCGAGGAATCAATATCTCCAAACCTATCACTTCGGGCTGCTGTGCAGGCATATCGTCGGGAGGAGGAGTCTCAATTCTACCGGTCACCTAAAAGAAGAAGAGAGAGATTTGATCAGGGTGGATTTGGAGATTCATCTGTTATGGAACCATCAAGGAGTAGAGGTGTTCAGTTTCCGTTTGCTGTTATGGACCGGGTTGTCATAAAGGGAAACAAAAGGACTCCAGAACGCTTTGTTGGGCGTGAAGCGATTGTAACAACGCAATGCCTGAATGGATGGTATGTGGTGAAGACATTGGACAATGCAGAGAGTGTAAAGTTGCAGTATCGATCTCTTGCTAAGGTTTTGGATGATCCTTCAAAGCCTGCCTCCAGCAAGATGTCACCTAATTGGCTTTAG 1281 0.5051 MSSEDITLVPDQRIENGLTSPLVFQDDPLRFNCPTPQHRVGDPGPKTRELGAFIDEKMFIDRGRFFAAQNPDFRRYADCSSRQDPRNWTVNGTAATPSGDDDSDEDDEDDDEDDDDEGDTEVEGLVGGGSKSEIIANNNGSGSNLPSVTNGKAHTFVSGRDLLGKDGGEIGQLVLSNMSGGGDEDQRQEGLGKSQNSVTVAETDCEEYYSHYLQGADGASGHKVMVDSGCGFSGRKDAMYSTESGESLRNILSDPVTGALMDDAMILPCGHSFSGSGIQHVIRMKACCTCSQPITEESISPNLSLRAAVQAYRREEESQFYRSPKRRRERFDQGGFGDSSVMEPSRSRGVQFPFAVMDRVVIKGNKRTPERFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDPSKPASSKMSPNWL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0456 426 MobiDBLite consensus disorder prediction 77 149 - -
Pvu9g0456 426 MobiDBLite consensus disorder prediction 82 98 - -
Pvu9g0456 426 Pfam U-box domain 252 317 IPR003613 GO:0004842|GO:0016567
Pvu9g0456 426 MobiDBLite consensus disorder prediction 132 149 - -
Pvu9g0456 426 MobiDBLite consensus disorder prediction 99 122 - -
Pvu9g0456 426 MobiDBLite consensus disorder prediction 323 344 - -
Pvu9g0456 426 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 56 426 - -
Pvu9g0456 426 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 56 426 - -
Pvu9g0456 426 ProSiteProfiles U-box domain profile. 247 319 IPR003613 GO:0004842|GO:0016567
Pvu9g0456 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 327 IPR013083 -
Pvu9g0456 426 SUPERFAMILY RING/U-box 247 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0456 Pvu-Chr9 8549337 8554240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0456 194 426 Plant U-box Gene Family AT5G05230 59.091 5.45e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0456 - - gmx:100786717 688.337