Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0453 ATGCGAGCGTTATTTTCGAACATGAAAGGTTTTCTTTTACTTGTGTGGTTGTTGGAGGTGGTTTGTGTGGCGGTGGCGGCGGTGAACCCCTCTCTGAACGATGACGTTTTGGGGCTGATTGTGTTCAAGGCTGACATACGAGATCCGAAGGGCAAGCTTGCGTCTTGGAGCGAGGACGATGAGAGTGCGTGTGGAGCTGGTTGGGTTGGGGTGAAGTGCAACCCTAGATCCAACAGAGTGGTGGAGATTAACCTTGATGGGTTTTCTCTCTCTGGGAGAATAGGTCGAGGGTTGCAAAGGTTGCAGTTTCTAAGGAAGCTTTCTCTGGCGAACAACAACCTCACTGGGGGGATAAACTCCAACATTGCTCGAATAGATAGTCTTAGGGTCATCGACTTGAGTGGCAATAGTCTCTCAGGGCAGGTGTCCGATGATGTTTTCCGACAATGTGGGTCTCTCAGGGCTGTTTCCTTGGCTAGGAACAGGTTTTCTGGGTCCATTCCTTCTGCTTTGGGGGCGTGTTCTGCTCTTGCTGCTATAGACCTTTCTAATAACCAGTTTTCTGGTTCTGTCCCCTCCGGGGTTTGGTCTTTGAGTGCTCTTAGGTCCTTGGATTTGTCTGATAACTTGTTGGAGGGAGAGATTCCTAAGGGGGTTGAGGCCATGAAGAATTTAAGGAGTGTTAGCTTGGCCAGGAATCGTTTAACTGGGAATGTTCCTGGTGGGTTTGGGAGCTGTTCGCTTTTGAGGTCCATTGATTTGGGGGATAATTCATTTTCTGGGAGTATTCCTGGTGATTTCAAGGAACTTGCATTGTGTGGTTACCTTAGTTTGCGAGGGAATGCTTTTTCTGGAGAGCTTCCTGAGTGGATTGGGGAGATGAGAGGTCTTGAAACGTTGGACCTTTCAAACAATGGGCTTACTGGTCAGGTTCCAAACTCTGTTGGAAATCTTCAGTCATTGAAGATGTTGAATTTTTCTGGGAATAGTTTCGGTGGTAGTCTTCCTGAGTCTATGGCTAATTGTACGAAACTTTTGGTGTTGGATGCCAGCCGGAATTCGATGTCCGGGGGGCTTCCATTGTGGATTTTCAAGTCAGATTTGGACAAGGTTTTGTTGTCGGAAAATGGCGCAAGTGGTAGCAAGAAAAGCCCTTTGATTTCCTTGGCTGAAGTTGCAGTTCAGAGTCTTCAAGTTTTGGATTTGTCTCACAATGCATTTTCTGGTGAAATCACATCTGCTGTTGGAGGTTTAAGCAGCTTGCATGTTTTGAATTTAGCAAATAACTCTCTTATAGGTCCTATACCAGCTGCAATTGGAGGAGCTGTGTCCTTGAAAGAACTGGTACTGAAAAAGAACTTCCTAATTGGGAAAATTCCAATGTCAATTGAGAACTGCACTTTGCTAACTACTCTGAGCCTATCCCAGAACTGGCTGAGTGGCCCTATACCTGCAGCAGTTGCAAAACTTACCAACCTGCAAACTGTGGACTTATCTTACAACAACCTTACTGGAAACCTTCCTAAGCAACTGGCCAACCTTGCCAATCTTCTTGCATTCAATTTATCTCACAACAACCTTCAGGGTGAACTGCCGGCTGGTGGTTTTTTCAACACCATTTCACCCACCTCTGTTTCTGGCAATCCATCACTTTGTGGAGCTGCAGTAAACAAATCATGCCCTGCTGTCCTCCCAAAGCCTATTGTTCTAAATCCCAACACTTCTACTGACGCAAGCCCGGGTGCATTGCCTCAAAATTTGGGTCACAAAAGAATCATTCTCAGCATTTCGGCACTCATTGCCATTGGTGCAGCTGCTGTCATTGTAATTGGTGTTATTAGCATCACCGTTCTCAATCTCCGTGTTCGGTCCTCCACATCACGAGATGCAGGTGCCCTCACATTTTCTGCAGGAGATGAATTCAGCCGTTCCCCTACTACAGATGCCAACTCTGGCAAGCTTGTGATGTTTTCTGGTGAGCCAGATTTCAGTTCTGGTGCGCATGCTTTGCTGAATAAGGACTGTGAGCTTGGGCGTGGAGGATTTGGTGCAGTGTACCAAACGGTTCTTAGAGATGGGCATTCAGTTGCAATAAAGAAGCTCACTGTATCAAGCCTTGTGAAGTCTCAAGAAGATTTTGAAAGAGAAGTAAAAAAGTTGGGAAAAATCAGACACCAAAACCTGGTGGAACTTGAGGGTTATTATTGGACTCCATCGCTGCAGCTTCTTATATACGAGTACGTCTCCGGTGGCAGTCTGTATAAGCATCTCCATGAAGGATCTGGTGGAAACTTCCTCTCATGGAATGAGAGATTTAATGTGATTCTGGGAACGGCCAAGGCCTTGGCACACTTGCACCAGTCCAACATTATTCACTATAACATAAAGTCAACCAATGTCCTTCTTGACAGTTATGGTGAAGCAAAGATAGGGGACTTTGGCCTAGCAAGGCTGTTACCAATGCTTGACCGATATGTGTTGAGCAGCAAAATTCAGAGTGCACTGGGATACATGGCACCGGAGTTTGCGTGCAAAACAGTGAAAATCACTGAGAAGTGTGATGTATATGGGTTTGGGATCCTGGTTTTGGAGATAGTAACAGGGAAGAGGCCAGTTGAATACATGGAGGATGATGTGGTGGTACTTTGTGACATGGTGAGAGGCGCTTTGGAAGAAGGTAGAGTGGAGGAATGCATTGATGAGAGGCTTGAAGGGAAATTCCCAGCAGAAGAAGCCATTCCTGTAATGAAGTTAGGCTTAATATGTACTTCTCAAGTGCCATCTAACAGGCCTGACATGGGAGAGGTAGTTAACATATTGGAGCTCATAAGATGTCCCTCTGAAGGACAAGAAGAATTGGGATGA 2865 0.4593 MRALFSNMKGFLLLVWLLEVVCVAVAAVNPSLNDDVLGLIVFKADIRDPKGKLASWSEDDESACGAGWVGVKCNPRSNRVVEINLDGFSLSGRIGRGLQRLQFLRKLSLANNNLTGGINSNIARIDSLRVIDLSGNSLSGQVSDDVFRQCGSLRAVSLARNRFSGSIPSALGACSALAAIDLSNNQFSGSVPSGVWSLSALRSLDLSDNLLEGEIPKGVEAMKNLRSVSLARNRLTGNVPGGFGSCSLLRSIDLGDNSFSGSIPGDFKELALCGYLSLRGNAFSGELPEWIGEMRGLETLDLSNNGLTGQVPNSVGNLQSLKMLNFSGNSFGGSLPESMANCTKLLVLDASRNSMSGGLPLWIFKSDLDKVLLSENGASGSKKSPLISLAEVAVQSLQVLDLSHNAFSGEITSAVGGLSSLHVLNLANNSLIGPIPAAIGGAVSLKELVLKKNFLIGKIPMSIENCTLLTTLSLSQNWLSGPIPAAVAKLTNLQTVDLSYNNLTGNLPKQLANLANLLAFNLSHNNLQGELPAGGFFNTISPTSVSGNPSLCGAAVNKSCPAVLPKPIVLNPNTSTDASPGALPQNLGHKRIILSISALIAIGAAAVIVIGVISITVLNLRVRSSTSRDAGALTFSAGDEFSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLRDGHSVAIKKLTVSSLVKSQEDFEREVKKLGKIRHQNLVELEGYYWTPSLQLLIYEYVSGGSLYKHLHEGSGGNFLSWNERFNVILGTAKALAHLHQSNIIHYNIKSTNVLLDSYGEAKIGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGILVLEIVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDERLEGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0453 954 Pfam Leucine Rich repeat 490 505 IPR001611 GO:0005515
Pvu9g0453 954 ProSiteProfiles Protein kinase domain profile. 671 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0453 954 SUPERFAMILY Protein kinase-like (PK-like) 675 938 IPR011009 -
Pvu9g0453 954 ProSitePatterns Protein kinases ATP-binding region signature. 677 700 IPR017441 GO:0005524
Pvu9g0453 954 Gene3D Transferase(Phosphotransferase) domain 1 748 952 - -
Pvu9g0453 954 Gene3D Phosphorylase Kinase; domain 1 665 747 - -
Pvu9g0453 954 SMART LRR_typ_2 514 538 IPR003591 -
Pvu9g0453 954 SMART LRR_typ_2 318 342 IPR003591 -
Pvu9g0453 954 SMART LRR_typ_2 222 245 IPR003591 -
Pvu9g0453 954 SMART LRR_typ_2 418 442 IPR003591 -
Pvu9g0453 954 SMART LRR_typ_2 294 317 IPR003591 -
Pvu9g0453 954 SMART LRR_typ_2 125 149 IPR003591 -
Pvu9g0453 954 SMART LRR_typ_2 490 513 IPR003591 -
Pvu9g0453 954 SMART LRR_typ_2 198 221 IPR003591 -
Pvu9g0453 954 SUPERFAMILY RNI-like 167 533 - -
Pvu9g0453 954 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Pvu9g0453 954 PRINTS Leucine-rich repeat signature 297 310 - -
Pvu9g0453 954 PRINTS Leucine-rich repeat signature 490 503 - -
Pvu9g0453 954 Gene3D Ribonuclease Inhibitor 33 312 IPR032675 -
Pvu9g0453 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 440 - -
Pvu9g0453 954 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 414 952 - -
Pvu9g0453 954 CDD STKc_IRAK 677 943 - -
Pvu9g0453 954 Pfam Leucine rich repeat 295 354 IPR001611 GO:0005515
Pvu9g0453 954 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Pvu9g0453 954 Pfam Leucine rich repeat 396 453 IPR001611 GO:0005515
Pvu9g0453 954 Pfam Leucine rich repeat 224 282 IPR001611 GO:0005515
Pvu9g0453 954 Pfam Protein tyrosine and serine/threonine kinase 673 939 IPR001245 GO:0004672|GO:0006468
Pvu9g0453 954 Gene3D Ribonuclease Inhibitor 313 564 IPR032675 -
Pvu9g0453 954 SUPERFAMILY L domain-like 80 188 - -
Pvu9g0453 954 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 414 952 - -
Pvu9g0453 954 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 11 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0453 Pvu-Chr9 8504164 8508829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0453 8 954 Receptor kinase-like Gene Family AT3G56370 66.018 0.0 1238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pvu9g0453 PK_Tyr_Ser-Thr 4.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0453 - - gmx:100791629 1661.35