Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0449 ATGTTCTTTTTATATTCTTGCTTCGATTTTTCCTTAACAACTGACACCACACCACAGCACCTACATAGAAGCTTAGTACGAACCTTGCACTTTCAGACACATATAAATATTATTATCACCACTTTTCTATATTTTCAAATTTCACCGCATGAGAACTGCAAACTCCTAGAAGCAATGGAAGAGGTAATTAACTCGATTCATCGCGCTTCTGAATTGATTCAAAGGCTTGAACAAGACCTACCCAACATGGTGAACCAACCAGGGACGCTGTCCTTGTCCATTGATGAAATAACTGAGGCAATCACTGCCGCCAAGGAAAAGCTGTTGCTAATTTCCCGACATAACCAAACGTCGGAATCTCCTCCAATGTTGCTTCATGAAACGACACCGCAGCAGCCTCAGATGGATGCTACTCTAATGCAGGAATGGTTAAGGTCTAGTCATGCATTAACGATGGATCAGTTGTTTCAAATGCAACAACGTGCTGCAAGGAGCAGTTTGCAGATTGGTGAAATGGGAGGGAGAGAGGTGGAAGATTCAGAGAGAAGCATGGGATCCGAAGGAGATCAAGGGCAAGGAATCCACGCACCTTCACGACCACGAAGAAGAAGCAGGGAAGCTAATCAAGAGAAGAAGAAAATTCTGGTTCCTGCCCCACAGTTTGGAAACACAGAGATGCCACCAGAGGATGGTTTCACTTGGAGGAAATATGGCCAGAAAGAAATACTTGGATCCAAGTACCCAAGGAGTTACTACAGATGCACACATCAGAAGCTATATGAATGCCAAGCGAAGAAGATGGTGCAAAGACTTGATCATAATGCTAACATATTTGAGGTAACATACAGAGGGAAACACACTTGCCATATGTCCTCCACAGCACCATCATCATCATCACTTCCCCTAGAACAACTTTTGGTGGACATGACACAAAGTAGTAACACCATTTCCTCTCAGTTGTCTCCGTCAGTGAATCTCAGCCTCCTTCCCGGTAGTGGCGCCGCCGCCACCACTAGTGGCAGGGGCGGAGCCTCCACCTCAAGATTCGGTGCTGATTATGCTGTGGTGGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGTGGCAATAACAGCATGGAATTTCTCTTCTCTCCCGCTGAAGATAAAAGTGATGCAAATTGA 1167 0.4507 MFFLYSCFDFSLTTDTTPQHLHRSLVRTLHFQTHINIIITTFLYFQISPHENCKLLEAMEEVINSIHRASELIQRLEQDLPNMVNQPGTLSLSIDEITEAITAAKEKLLLISRHNQTSESPPMLLHETTPQQPQMDATLMQEWLRSSHALTMDQLFQMQQRAARSSLQIGEMGGREVEDSERSMGSEGDQGQGIHAPSRPRRRSREANQEKKKILVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKMVQRLDHNANIFEVTYRGKHTCHMSSTAPSSSSLPLEQLLVDMTQSSNTISSQLSPSVNLSLLPGSGAAATTSGRGGASTSRFGADYAVVDMADAMFNSGSSSGNNSMEFLFSPAEDKSDAN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0449 388 SMART WRKY_cls 228 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0449 388 SUPERFAMILY WRKY DNA-binding domain 225 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g0449 388 MobiDBLite consensus disorder prediction 167 212 - -
Pvu9g0449 388 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 59 322 IPR044810 GO:0003700
Pvu9g0449 388 Coils Coil 59 86 - -
Pvu9g0449 388 Gene3D WRKY domain 218 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu9g0449 388 ProSiteProfiles WRKY domain profile. 229 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0449 388 Pfam WRKY DNA -binding domain 229 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu9g0449 388 PANTHER WRKY TRANSCRIPTION FACTOR 55 59 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0449 Pvu-Chr9 8436346 8439505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0449 54 385 WRKY Transcription Factor Family AT2G40740 38.889 1.60e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu9g0449 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0449 - - pvu:PHAVU_009G043200g 715.301