Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0440 ATGAAGTTGCAGTTCTCTATTGTTGGACTTATTCTATTAGGCTCCACACTGTCTCTGTGTGGCCTGATAGTAGCTGACTTGAAGTCTGACCAACAAGCTCTGTTGGAATTTGCTTCAAGTGTCCCACATGCCCCAAGGCTCAACTGGAAGAATGACTCTGCTTCAATTTGCACCTCGTGGGTTGGTGTGACATGCAACTCAAATGGCACACGTGTCATAGGCCTTCATCTTCCAGGAATGGGATTCAGTGGGACCATTCAAGAGAGCAGCATAGGAAAACTAGATGCTCTTAGGGTCCTGAGTCTTCATTCCAATGGCCTTAGAGGAAATCTTCCTTCTAACATCCTCTCCATTCCTTCACTCCAATTTGTATACCTTCAGCACAATAGCTTCTCTGGCGCAATTCCTTCTCCTGTGTCCCCTAAACTCTTTGCGTTGGATATTTCCTTCAACTCCTTTTCTGGCAGCATCCCACCTGCATTTCAGAATCTGAGAAGACTCACTTGGTTGTATCTCCAAAACAATTCCATATCTGGGGCTATTCCTGATTTCAACCTTCCAAGGCTCAAACATTTGAACTTGAGTTACAATAACTTGAATGGCTCAATTCCAAATTCCATAAAGACATTCCCTTATTCCTCTTTTGTCGGGAACTCTCTCTTATGTGGGCCACCACTAAATGATTGCTCTACAATCTCCCCTTCTCCGTCTGCTTCCACTGATGATTACCAGCCACTCACTCCACCAACCGCCCAAAACCAAAAGGGTACCAACCATAAGAAAAGCTTTGGCCTGGCTACTGTCCTTGCTCTAGTCATTGGGGTCTTAGCCGTCCTCTCTCTACTAGTTGTAGCAATCTGTGTGTTCTGTTTGAAGAGGAAGAAAAACAGTAAAAGCAGTGGTGGCATACTGAAAGGAAAGGCTTCATGCGCTGGAAAGACAGAGGTTTCAAAGAGTTTCGGGAGTGGGGTGCAAGGGGCTGAGAAAAACAAACTATTTTTCTTTGAAGGTTCCTCTTCTAGCTTTGACCTTGAGGATTTGCTGAAGGCTTCAGCTGAAGTTCTTGGAAAAGGAAGTTATGGAACAGCATACAAGGCTGTTTTGGAGGAGGGAACAACAGTGGTAGTCAAAAGGTTGAAAGAAGTTGTGGTTGGAAAGAAGGAGTTTGAGCAGCATTTGGAGATTGTGGGGAGATTTGGAAGCCACCCAAATGTGATGCCCCTAAGAGCTTATTACTATTCCAAAGATGAAAAACTTATGGTTTACAATTACATGCCAGGTGGAAGCTTGTTTTTCTTGTTGCACGGAAACAAAGGTGCAGGAAGAACCCCACTAGACTGGGATTCCAGAGTGAAGATTGTGCATGGAGCTGCGAAGGGAATTGCTTTCATCCACTCCGAGGGAGGTCCAAAATTCACACATGGCAACATCAAGTCAAACAATGTGCTCATAAGCCAAGAACTAGAAGGCTGCATCTCTGATGTTGGATTGCCACCTCTAATGAACACCCCAGCAACCATGTCTAGAAGCAATGGCTATAGAGCTCCAGAAGTCACTGACTCAAAGAAGATCACTCAGAAGTCTGATGTATACAGCTTTGGTGTGGTGCTGCTTGAAATGCTGACAGGGAAGACCCCTCTGAGGTATCCAGGGTATGAGGATGTGGTTGATCTTCCAAGGTGGGTGAGATCTGTTGTTAGGGAGGAATGGACTGCAGAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAATATGTTGAAGAAGAAATGGTGCAGATGCTTCAGATTGCATTAGCATGTGTGGCTAAGGGGTCAGAAAATAGGCCTAGAATGGATGAAGTTGCTAGAATGATTGAGGAAATTAAGCATCCTGAATTGAAGAACAGGCCATCCTCTGAGTCTGAGTCAAATGTGCACACACCATGA 1923 0.4493 MKLQFSIVGLILLGSTLSLCGLIVADLKSDQQALLEFASSVPHAPRLNWKNDSASICTSWVGVTCNSNGTRVIGLHLPGMGFSGTIQESSIGKLDALRVLSLHSNGLRGNLPSNILSIPSLQFVYLQHNSFSGAIPSPVSPKLFALDISFNSFSGSIPPAFQNLRRLTWLYLQNNSISGAIPDFNLPRLKHLNLSYNNLNGSIPNSIKTFPYSSFVGNSLLCGPPLNDCSTISPSPSASTDDYQPLTPPTAQNQKGTNHKKSFGLATVLALVIGVLAVLSLLVVAICVFCLKRKKNSKSSGGILKGKASCAGKTEVSKSFGSGVQGAEKNKLFFFEGSSSSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQHLEIVGRFGSHPNVMPLRAYYYSKDEKLMVYNYMPGGSLFFLLHGNKGAGRTPLDWDSRVKIVHGAAKGIAFIHSEGGPKFTHGNIKSNNVLISQELEGCISDVGLPPLMNTPATMSRSNGYRAPEVTDSKKITQKSDVYSFGVVLLEMLTGKTPLRYPGYEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKGSENRPRMDEVARMIEEIKHPELKNRPSSESESNVHTP* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0440 640 MobiDBLite consensus disorder prediction 234 258 - -
Pvu9g0440 640 Pfam Protein kinase domain 353 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0440 640 Pfam Leucine Rich repeats (2 copies) 166 204 IPR025875 -
Pvu9g0440 640 CDD STKc_IRAK 355 620 - -
Pvu9g0440 640 Gene3D Phosphorylase Kinase; domain 1 315 424 - -
Pvu9g0440 640 PANTHER RECEPTOR-LIKE KINASE 4 638 - -
Pvu9g0440 640 Gene3D Ribonuclease Inhibitor 141 231 IPR032675 -
Pvu9g0440 640 ProSitePatterns Protein kinases ATP-binding region signature. 355 386 IPR017441 GO:0005524
Pvu9g0440 640 Gene3D Transferase(Phosphotransferase) domain 1 425 638 - -
Pvu9g0440 640 SUPERFAMILY Protein kinase-like (PK-like) 353 620 IPR011009 -
Pvu9g0440 640 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Pvu9g0440 640 Pfam Leucine Rich Repeat 144 164 IPR001611 GO:0005515
Pvu9g0440 640 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Pvu9g0440 640 MobiDBLite consensus disorder prediction 620 640 - -
Pvu9g0440 640 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu9g0440 640 PANTHER OS05G0588300 PROTEIN 4 638 - -
Pvu9g0440 640 SUPERFAMILY L domain-like 39 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0440 Pvu-Chr9 8334746 8339792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0440 16 635 Receptor kinase-like Gene Family AT5G58300 59.486 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu9g0440 Pkinase 8.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0440 - - gmx:100818444 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1937 8 49029268 49033295 Pvu9g0440 9 8334746 8339792 PCT