Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0424 ATGGTGGACTCTGGTGGTGATGATGAGCCTGAGAAGAAGAAGGAGGAGGTTGTTGAGACTTTGTCATTCTTCAAACTCTTGAGCTATGCTGACTTGGTAGATTGGATTCTGATGGGTTTGGGAAGTGTTGGTTCCATTGTGCATGGCATGGCACTTCCTGTGGGCTATCTCTTGTTGGGGAAAGCTCTTGATGGTTATGGAAACAATATCCAAGACCTAGATGCCATGGTTAAGGCTCTTAAAAAGGTTGTTCCATTTGTGTGGTATATGGCCATCGCCACATTTCCTGCTGGGGTACTTGAAATTGGTTGCTGGATGTATGCAAGTGAAAGACAGTTATTGCGGCTAAGATTAGCATATCTAAGAGCAGTTCTGAACCAAGATATAGGAGCTTTTGATACAGAGTTAACAAGTGGGAAAGTCATCAGTGGAATAAGCAAGCACATGAGTGTCATACAAGATGCCATTGGTGAGAAGTTGGGTCACTTCACCTCTAGCTGTGCAACTTTCTTTGCTGGAATTGTGATTGCTGCCATATGCTGTTGGGAAGTGACGCTTCTCTGTTTAGTGGTTGTCCCACTTATCCTTATAATTGGGGCAACTTACACCAAGAAAATGAACACCATATCAACCTCCAAAATGCTTTTCCATTCTGAAGCTACATCTATGATAGAGCAGACAATATCACAAATAAAAACAGTTTACGCTTTTGTTGGAGAGAGCTCTGCAATCAAATCCTTTACAGAGAACATGGATAATCAATATATTATAAGCAAAGTGGAGGCAGCTGTGAAAGGAGTTGGGACAGGGATGTTGCAAACAGTGAGTTTCTGTTCTTGGGCGCTCATTGTATGGGTTGGAGCTGTTGTGGTCAGAGCAGGAAGAGCAACAGCAGGAGACATAATAGCTGCAGTGATGAGTATTCTCTTTGGTGCCATATCACTCACTTATGCAGCACCAGACATGCAAGTATTCAATCAGGCAAAAGCTGCAGGATATGAAGTTTTCCAGGTGATCCAAAGAAAGCCTCTGATAAGTAATGATTCAGAAGGGAAGATGCCTAGCAAAATCAAAGGTGATATTGACTTTCAATATGTTCACTTTTCCTACCCATCACGGCCAGACAAACCTATCCTTCAAGGACTGTCCTTGTCAATTCCAGCTGGAAAGACAGTAGCACTAGTTGGTACCAGTGGCTGTGGAAAGAGCACTGTTATTTCCCTTGTTAATAGATTTTACGATCCCTCAAGAGGAGTTATCTTTATTGATCATCACAATATCAAGGATCTTAATCTGAAGTTCCTTCGACGAAACATAGGGGTCGTTTCCCAAGAGCCATCACTCTTTGCAGGCACCATCAAGGATAACTTGAAAGTGGGGAAAATGGAGGCAGATGATCAAGAGATTCAGAAGGCAGCAGTAATGTCAAATGCACACTCTTTCATATCTCAGCTGCCTAATCAGTACCTAACAGAGGTTGGAGAAAGGGGAGTCCAATTATCAGGAGGCCAAAAACAGAGAATTGCAATAGCCAGAGCCATTCTGAAAAATCCTCCCATCCTTTTGCTTGATGAAGCCACTAGCGCCCTAGATTCAGAGTCTGAAAAGCTGGTTCAAGAAGCACTTGAGACAGCTACGCAGGGAAGGACTGTCATCCTGATTGCACACAGGCTCTCAACAGTTGTAAATGCAGATATGATTGCTGTAGTCGAGAATGGACAAGTTGCGGAGACAGGAACACACCAGAGTTTGTTAGACACAAGCACATTCTATAGTACATTATTTAGCATGCAGAACCTTGAACCAGTTCCTGAACCCAGAATTTGGTTTGGTTTGAAAAAGAGGGAGCTGGTGAAGATTTCTATTGGCTCATTTGCAGCAGCTTTCTCTGGCATCTCAAAGCCATTTTTTGGGTTCTTCATCATAACCATAGGAGTAGCATACTTTAAGGAAGATGCAAAAACGAAAGTTGGACTTTATTCAGCCATCTTCACTGCAGTAGGAATGCTTTCATTATTCAGCAACACCATCCAGCACTACTTCTTTGGAGTGGTTGGAGAAAAGGCCATGGCAAATCTCAGACGTGCTCTGTATTCAGGTCTGCTACGTAATGAAGTAGGTTGGTTTGACAAATCAGAGAATACTGTTGGTTCATTGACTTCGCGCATTATCAGTGACACTGCTATGGTCAAAGTCATCATTGCTGATCGAATGTCTATGATCCTGCAATGTGTTTCCTCCATACTGATAGCAACAGTTGTCAGCATGGCTGTCAACTGGAGAATGAGTTTGGTAGCTTGGTCTGTGATGCCCTGCCACTTCATAGGTGGTCTTATTCAAGCCAAGTCTGCCAAAGGATTTTCTGGTGACTACTCCGCTGCACATTCTGAGCTTGTTACTCTTGCATCCGAGTCCACAACCAACATAAGGACTATTGCCTCATTTTGTCATGAAGAACAAGTAATGAGGAAAGCCAAAATATCCCTGGAAATTCCAAAGAAAAAGTATAGAAAAGAAAGTATCAAATATGGGATCATTCAAGGCTTCTCCCTTTGCTTATGGAACATTGCACATGCTGTTGCTCTGTGGTACACAACAATTCTGGTTGACAGACGTCAAGCCAGCTTTGAAAATGGAATAAGATCATACCAAATTTTTTCTCTCACAGTTCCTTCTATCACAGAATTATACACACTGATCCCAGCTGTCGTCTCTGCTATCAATATACTGACCCCAGCATTCAAAACCCTTGATCGTAAAACTCAAATTGAACCAGACACACCAGATGATTCACAACCAGAGAGGATCCAAGGAAATGTAGAGTTTGAAAATGTAAAATTCAACTACCCTTCAAGACCCGAAGTCACTGTTCTTGATAATTTCAGTTTGCAAATTGAAGCTGGATTGAAGGTGGCTTTCGTAGGACCAAGTGGAGCTGGAAAATCCTCTGTTTTGGCCCTTTTACTAAGATTTCATGATCCACAGGGAGGAAAAGTATTAATTGATAAGAAAGACATACGGAAATATAATCTAAGATGGTTAAGGACACAAATAGGACTAGTACAACAAGAACCACTGCTCTTTAATTGCTCAATTAGAGACAACATTTGCTATGGCAATAATGGGGCTTCTGAAAGTGAAATGGTAGAGGTTGCTAAAGAAGCAAACATACATGAATTTGTAAGTAATCTACCAAATGGATATAGCACTGTTGTTGGAGAGAAAGGCTGCCAGCTTTCCGGAGGTCAAAAGCAAAGAATAGCCATTGCCAGAACAATACTAAAGAAGCCTGCAATTTTACTCCTTGATGAAGCAACAAGTGCTCTTGATGCTGAGTCAGAAGGAATTATAGTAAATGCTTTAAACGCAATACATCTGAAGGAAGACAGTGGCTTGCGTTCAAAAACCACCCGGATAACAGTAGCTCATAGGCTTTCCACAGTGATAAACTCAGATACTATAATTGCCATGGACAAAGGTAAACTTGTACAGATGGGTTCCCACTCTACCCTAATAGCAGCAGAGTCAAGACTTTATTCAAGGATGTTCAGGTTACAGAGCTTCGAGGAAACTTCATAG 3579 0.4186 MVDSGGDDEPEKKKEEVVETLSFFKLLSYADLVDWILMGLGSVGSIVHGMALPVGYLLLGKALDGYGNNIQDLDAMVKALKKVVPFVWYMAIATFPAGVLEIGCWMYASERQLLRLRLAYLRAVLNQDIGAFDTELTSGKVISGISKHMSVIQDAIGEKLGHFTSSCATFFAGIVIAAICCWEVTLLCLVVVPLILIIGATYTKKMNTISTSKMLFHSEATSMIEQTISQIKTVYAFVGESSAIKSFTENMDNQYIISKVEAAVKGVGTGMLQTVSFCSWALIVWVGAVVVRAGRATAGDIIAAVMSILFGAISLTYAAPDMQVFNQAKAAGYEVFQVIQRKPLISNDSEGKMPSKIKGDIDFQYVHFSYPSRPDKPILQGLSLSIPAGKTVALVGTSGCGKSTVISLVNRFYDPSRGVIFIDHHNIKDLNLKFLRRNIGVVSQEPSLFAGTIKDNLKVGKMEADDQEIQKAAVMSNAHSFISQLPNQYLTEVGERGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDSESEKLVQEALETATQGRTVILIAHRLSTVVNADMIAVVENGQVAETGTHQSLLDTSTFYSTLFSMQNLEPVPEPRIWFGLKKRELVKISIGSFAAAFSGISKPFFGFFIITIGVAYFKEDAKTKVGLYSAIFTAVGMLSLFSNTIQHYFFGVVGEKAMANLRRALYSGLLRNEVGWFDKSENTVGSLTSRIISDTAMVKVIIADRMSMILQCVSSILIATVVSMAVNWRMSLVAWSVMPCHFIGGLIQAKSAKGFSGDYSAAHSELVTLASESTTNIRTIASFCHEEQVMRKAKISLEIPKKKYRKESIKYGIIQGFSLCLWNIAHAVALWYTTILVDRRQASFENGIRSYQIFSLTVPSITELYTLIPAVVSAINILTPAFKTLDRKTQIEPDTPDDSQPERIQGNVEFENVKFNYPSRPEVTVLDNFSLQIEAGLKVAFVGPSGAGKSSVLALLLRFHDPQGGKVLIDKKDIRKYNLRWLRTQIGLVQQEPLLFNCSIRDNICYGNNGASESEMVEVAKEANIHEFVSNLPNGYSTVVGEKGCQLSGGQKQRIAIARTILKKPAILLLDEATSALDAESEGIIVNALNAIHLKEDSGLRSKTTRITVAHRLSTVINSDTIIAMDKGKLVQMGSHSTLIAAESRLYSRMFRLQSFEETS* 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0424 1192 SUPERFAMILY ABC transporter transmembrane region 606 928 IPR036640 GO:0005524|GO:0016021
Pvu9g0424 1192 CDD ABC_6TM_Pgp_ABCB1_D1_like 38 335 - -
Pvu9g0424 1192 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 327 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu9g0424 1192 SUPERFAMILY ABC transporter transmembrane region 26 343 IPR036640 GO:0005524|GO:0016021
Pvu9g0424 1192 Gene3D - 930 1191 IPR027417 -
Pvu9g0424 1192 Pfam ABC transporter 958 1107 IPR003439 GO:0005524
Pvu9g0424 1192 Pfam ABC transporter 379 528 IPR003439 GO:0005524
Pvu9g0424 1192 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 940 1184 IPR003439 GO:0005524
Pvu9g0424 1192 CDD ABC_6TM_Pgp_ABCB1_D2_like 610 923 - -
Pvu9g0424 1192 Gene3D ABC transporter type 1, transmembrane domain 25 902 IPR036640 GO:0005524|GO:0016021
Pvu9g0424 1192 CDD ABC_MTABC3_MDL1_MDL2 940 1186 - -
Pvu9g0424 1192 ProSitePatterns ABC transporters family signature. 1079 1093 IPR017871 GO:0005524
Pvu9g0424 1192 CDD ABC_MTABC3_MDL1_MDL2 361 598 - -
Pvu9g0424 1192 Pfam ABC transporter transmembrane region 622 884 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu9g0424 1192 Pfam ABC transporter transmembrane region 40 312 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu9g0424 1192 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 607 1187 IPR039421 -
Pvu9g0424 1192 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 17 601 IPR039421 -
Pvu9g0424 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 932 1186 IPR027417 -
Pvu9g0424 1192 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 622 905 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu9g0424 1192 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Pvu9g0424 1192 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524
Pvu9g0424 1192 PANTHER OS08G0153200 PROTEIN 607 1187 - -
Pvu9g0424 1192 PANTHER OS08G0153200 PROTEIN 17 601 - -
Pvu9g0424 1192 Gene3D - 351 599 IPR027417 -
Pvu9g0424 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 598 IPR027417 -
Pvu9g0424 1192 SMART AAA_5 967 1161 IPR003593 -
Pvu9g0424 1192 SMART AAA_5 388 580 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0424 Pvu-Chr9 8145395 8154324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0424 10 600 Calmodulin-binding Proteins AT2G36910 35.880 9.32e-102 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0424 K05658 - zju:107414909 1763.04