Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0407 ATGACTTCCGTCGACTGTTATCCGTCGCGCGGGGACGATGTCGCCGCCGTCTCGCTGGATTCTCTACCGTTAGGGTTCCGATTCAGACCTACCGACGAGGAACTCATCGATTACTACCTGCGACAGAAGATTAACGGCAATGGTGCCGAGGTTTGGGTTATCCGAGAAATTGATGTCTGCAAATGGGAGCCGTGGGACATGCCTGATTTGTCGGTGGTACGGAACAAGGATCCGGAATGGTTCTTCTTCTGTCCACAGGACAGAAAGTATCCGAATGGGCATCGATTGAACAGGGCAACGACTCATGGGTATTGGAAGGCAACTGGGAAGGATCGTAGAATTAAGTCTGGGATGATGTTGATTGGAATGAAGAAGACTTTGGTGTTCTACACTGGTCGTGCACCCAAAGGGAAGAGGACTAATTGGGTTATGCACGAATATCGCCCCACCTTGAAGGAGCTTGATGGCACCAATCCTGGACAGAATGCATATGTCCTTTGTCGCTTGTTTAAGAAACACGACGAGAGCCTTGAAGTTTCGCACTGTGATGAGGCAGAACAGACTGCTTCAACTCCGATTGCTGCCAATTACTCTACGGAGGAAATACAGTCTGGTCTGGCTGTTGTTGCAGTGTCCCCATCACTTGTTACAGAGGATGATAAGCACCAGGCAATTATCCCTACGCACTCTGAGGAAGCAATATCCAACGTTATAACTCCTGTTGATTGTCATAGTGATGGATATGATATTTCTGATGCACAAAATAATTATGTGGCACCAGCGGCAGAGGAGTTTCAGCCGTGGAACGTTGATATGTGTTACGATCCAAAAAACGAGCTATTGTATGACAGATTATTTTCCCCTGTACTTGCACTTCAACCAGAATTTCCTTATCAATCAAACAGTGAATCAGATAGTCGGTATGGGCTTCAATATGGCACCAATGAGACAAACATTTCAGACTTTTTGAATTCTGTTGTTAACTGGGACGAACTACCCTACGAGGAGCCCAATTGTCAACAGTGGAGCTCCCCCTCGTTTAATGTTCAGAATAGTGTTTTAGGCAGCCACATAGATTCTGAACTTGCCAATATGACATATATGCAAGCTGGTTACGCTGAGGAGGCAAACGACAGAAAGATTCCTTTGGTGATAGCTCCAGAATTTTGCAGCACCACTGGCATCCCCATTGACCGTGGTGGTGGTGATGAGCAGAAGAGCAATGTTGAGTTATTTCAAAACAATTCCCAGAGAGCTTTTACTGATTATCAGCAATGTAGTATCTTTAATGCAGTTCCTTGTGGGGATACTGGAATCATTAGGAAGACACGAGTGGTTCAAAATGAAAAGCTAAGTGCAAACGTTACACAAGGTACAGCGCAGAGGAGAATTCGTTTGGTGCAGAAGACGCGAAATGAACTCTCAAATAAGATGGTGAAAAATGAGCTTGACTCAAAATCAATCATTGCAGTGGAGGAGAAAGCTTCAGAAAACCATGCTTCGGATGAAAGTGCTACTCTTACTAATGATGGGAATGAACTGCAGAAGACACCTGAACCAAATGGCAATAGAAAGATTTGTCGACAAGTTGCCAAAGCAAGTTCCACCTTGGGGTTAAAGGATTTTTTATTGCTCAGAAGGGTGCCATACATTTCAAAGGCTACCTCCAATCGTGCCAAGTGCTCTTCTATTTTTGTAGTTTCTGCCTTTCTAATGGTCTCATTAGTGGTCTTTACTGACATCTGCGGATATCTTAAATTCTAA 1764 0.4456 MTSVDCYPSRGDDVAAVSLDSLPLGFRFRPTDEELIDYYLRQKINGNGAEVWVIREIDVCKWEPWDMPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRRIKSGMMLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKHDESLEVSHCDEAEQTASTPIAANYSTEEIQSGLAVVAVSPSLVTEDDKHQAIIPTHSEEAISNVITPVDCHSDGYDISDAQNNYVAPAAEEFQPWNVDMCYDPKNELLYDRLFSPVLALQPEFPYQSNSESDSRYGLQYGTNETNISDFLNSVVNWDELPYEEPNCQQWSSPSFNVQNSVLGSHIDSELANMTYMQAGYAEEANDRKIPLVIAPEFCSTTGIPIDRGGGDEQKSNVELFQNNSQRAFTDYQQCSIFNAVPCGDTGIIRKTRVVQNEKLSANVTQGTAQRRIRLVQKTRNELSNKMVKNELDSKSIIAVEEKASENHASDESATLTNDGNELQKTPEPNGNRKICRQVAKASSTLGLKDFLLLRRVPYISKATSNRAKCSSIFVVSAFLMVSLVVFTDICGYLKF* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0407 587 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Pvu9g0407 587 MobiDBLite consensus disorder prediction 501 519 - -
Pvu9g0407 587 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Pvu9g0407 587 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Pvu9g0407 587 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 456 - -
Pvu9g0407 587 SUPERFAMILY NAC domain 17 172 IPR036093 GO:0003677|GO:0006355
Pvu9g0407 587 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 17 456 - -
Pvu9g0407 587 MobiDBLite consensus disorder prediction 494 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0407 Pvu-Chr9 8001373 8005081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0407 14 214 NAC Transcription Factor Family AT4G35580 67.662 1.94e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu9g0407 NAM 2.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0407 - - gmx:100777071 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1959 8 49328054 49331888 Pvu9g0407 9 8001373 8005081 PCT