Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0386 ATGAACACAAACAGAGCCGAAGCAGAACGCTTGCTGGCCATCGGCGAGAAGCTGCTGCAGAGCCGCGACCTGAGCGGCTCCCGCGACTTCGCCATTCTCGCGCAGGAAGCTGAGCCGCTCCTCGACGGCTCTGATCAGATCCTCGCCATCGTCGACGTCGTCGTCGCCGCCGAGAAGCCGATCCACAACAACCACCTCGATTGGTACGCCATTCTCCAAGTGGATCGCACGTGCCAAGACCTTGATCTCATAAAAAAACAGTACCGCAGACTCGGACTTCTCCTTCATCCTGACAAGAACCCTTTCTCCCTCGCCGACCACGCCTTCAAGCTTGTCACCGATGCCTGGGCCGTTTTATCCGACCCGGTTCAGAAGGCCCTTTACGACCGAGACGTCGCCGGTTCGGTCGAAAGTGCGAGTTTCTGGACCGCGTGCCCGTACTGTTATTTTCTCTTCGAGTACCCTGTGGATTGCGAGGGGCGTTGCCTGAGGTGCCAGAATTGCGAGAGGATGTTCCACGGGCTTTCGATTCCATCGCTCCCCCCGCTCGTGCCGGGCCAGGAGGCCTATTATTGTAACTGGGGGTGCTTGCCCATGGGCTTTGTGTTTGGAACTTCGGGCTCCAATGGGCCTGGGTCCGTGCCCGAGCTCGTGATTGAGAATGGTCCGAAGGCTGCTTCGAATGGGGCTGGTTCGGAATTGGGTTCCCGTTCTGCGCGGAAGCGGGGAAGGCCTCGAAAGGGGGTGTGA 750 0.592 MNTNRAEAERLLAIGEKLLQSRDLSGSRDFAILAQEAEPLLDGSDQILAIVDVVVAAEKPIHNNHLDWYAILQVDRTCQDLDLIKKQYRRLGLLLHPDKNPFSLADHAFKLVTDAWAVLSDPVQKALYDRDVAGSVESASFWTACPYCYFLFEYPVDCEGRCLRCQNCERMFHGLSIPSLPPLVPGQEAYYCNWGCLPMGFVFGTSGSNGPGSVPELVIENGPKAASNGAGSELGSRSARKRGRPRKGV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0386 249 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Pvu9g0386 249 MobiDBLite consensus disorder prediction 214 249 - -
Pvu9g0386 249 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 232 - -
Pvu9g0386 249 Gene3D DnaJ domain 54 144 IPR036869 -
Pvu9g0386 249 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Pvu9g0386 249 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pvu9g0386 249 PRINTS DnaJ domain signature 88 103 IPR001623 -
Pvu9g0386 249 PRINTS DnaJ domain signature 104 124 IPR001623 -
Pvu9g0386 249 CDD DnaJ 67 121 IPR001623 -
Pvu9g0386 249 Pfam DnaJ domain 67 129 IPR001623 -
Pvu9g0386 249 SMART dnaj_3 66 124 IPR001623 -
Pvu9g0386 249 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Pvu9g0386 249 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0386 Pvu-Chr9 7758791 7761139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0386 2 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 53.629 1.80e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0386 - - gmx:100802055 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0386 9 7758791 7761139 Pvu9g0386 9 7758791 7761139 ECH
Pvu8g1882 8 48017200 48018207 Pvu9g0386 9 7758791 7761139 PCT