LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g0383	ATGTTGTGCTCATCGCGTAACCTTGGATTTCATCTCACTTCAATTAGACTGTCTCGCGACGTCAGGCTGTACAGTAATCATGGAAGTTGTTGTTTTTGTCAGAAGCGCGTGCATGGGGATGGATTATGTTTTGTTGCCATTAGTCTTTTGCCACATGGTTTGTTGGGAGGTGGCGTACGTACCATCAGGAGGAGTTTGGCAAGGAGAGCGATTCCGACAACGACGACCATGGACACAGTGGCGATGTCAAGGTCATATAATGCTATAGCGGGAAAACCAATTGCGATTCAATTCATCCCCGCCCTTGGTATTATTGGGTTTGCTGTTTTTGGTCTTGAGCCTCTTGTGCGACTGAGCAGGAATCTGTTTCTCCAAGAAAGTACTGATAGGAGTTGGAAGAAAAGTAGTTCACGTTATATTTTGACATCTTATTTTCGACCTATGCTGCTGTGGACTGGAGTAATGCTCATATGCAGGGATTTAGATCTACTAGTCCTACCATCAGAAACTAGTCAGGCTATCAAGCAACGGCTGCTGAGTTTTGTGAGATCGTTGTCAACTGTGCTTACAATTGCTTACTGTTCTTCAAGCTTAATTCAACAAGCACAAAAATTTTGTATGGAGGCAAGTGGCTCCAGTGATGAAAGAAATATGAGCATTGATTTTACTGGGAAAGCTGTATATACTGCAATTTGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTATCTCCACACAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTCTTGATTTCCCTTGCAGGTCGTGAGATATTTACAAACTTCCTTTCGAGTATGATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAAATTAAAGGATACGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAATTAGAGGTTCTGATTGTGAAGCAATTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGTATAAAGACTCGTCTGGCTATCAGTCACTTGGATGTTAACAAGATTAATAGTATAATAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCCCAAGTAGAGCAAAGAAAATTGCACAGAAGGGTTTTTCTAGAGAACATTGATCCAGAAAATCAGGCTCTTATGATATTGGTATCCTGCTTTGTTAAAACTTCACGTTCTGAAGAGTACCTGCGTGTAAAGGAGGCAATCCTCTTGGATCTTCTCAGAGTTATAAGTCATCATCGAGCTCGGCTAGCCACACCCATCCGCACAGTTCAGAAGATGTACAGTGATACTGATTTCGATATTGATCCATTTGATGACACCATTTCCACTCGATCCAGATCAAAGAAAAACCGTCCTTTCACACTGATAGATCCACCTTATAAAGTTAAGTCTTCAACTCCTTCAACCATAACAAATGAGGACAGAGATGGTAAGATGGATGAAACCTTGCCATCTGACATCAAAGTAGACTGTGATGAATTTTCTGTTACAGCAAGTTCCATCCAGAAGACCTCCAAATCCCAAAAGCCCAAAAAGGAAAGAGCAGGAAGCACTGGAAAGGAAACAACAACATCAAAGCTAGATGATCAGAAATCTGTTGTTTCCACGTCTTCATCATCATCATCATCACTTAGTCGTTCTTTGGAAGAGAATATTATTCTTGATATTGCTGTGATGGGCTCAGAGAGAACTCTTGCAGTTGATGAAGAATTGGTTAATTCTATCCCTGCAGAATCACAAGAAGTTGCAGCCCATCAGAATGGGAGTGAGTCTCCTATTTGCAAGGATAAGAAGGATGGTGAGATGTCTTCATTGCCTCCTACTAAACAAAAGGATTAA	1896	0.414	MLCSSRNLGFHLTSIRLSRDVRLYSNHGSCCFCQKRVHGDGLCFVAISLLPHGLLGGGVRTIRRSLARRAIPTTTTMDTVAMSRSYNAIAGKPIAIQFIPALGIIGFAVFGLEPLVRLSRNLFLQESTDRSWKKSSSRYILTSYFRPMLLWTGVMLICRDLDLLVLPSETSQAIKQRLLSFVRSLSTVLTIAYCSSSLIQQAQKFCMEASGSSDERNMSIDFTGKAVYTAIWVAAVSLFMELLGISTQKWLTAGGLGTVLISLAGREIFTNFLSSMMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIIRGSDCEAIHIPNHNLSVNVVRNLSKKSHWRIKTRLAISHLDVNKINSIIADMRKVLAKNPQVEQRKLHRRVFLENIDPENQALMILVSCFVKTSRSEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKMYSDTDFDIDPFDDTISTRSRSKKNRPFTLIDPPYKVKSSTPSTITNEDRDGKMDETLPSDIKVDCDEFSVTASSIQKTSKSQKPKKERAGSTGKETTTSKLDDQKSVVSTSSSSSSSLSRSLEENIILDIAVMGSERTLAVDEELVNSIPAESQEVAAHQNGSESPICKDKKDGEMSSLPPTKQKD*	632

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu9g0383	631	MobiDBLite	consensus disorder prediction	457	503	-	-
Pvu9g0383	631	Gene3D	-	283	336	IPR023408	-
Pvu9g0383	631	MobiDBLite	consensus disorder prediction	596	631	-	-
Pvu9g0383	631	MobiDBLite	consensus disorder prediction	547	565	-	-
Pvu9g0383	631	MobiDBLite	consensus disorder prediction	518	565	-	-
Pvu9g0383	631	Gene3D	-	177	282	-	-
Pvu9g0383	631	PANTHER	OW CONDUCTANCE MECHANOSENSITIVE CHANNEL	77	550	IPR045042	-
Pvu9g0383	631	PANTHER	OW CONDUCTANCE MECHANOSENSITIVE CHANNEL	12	55	IPR045042	-
Pvu9g0383	631	PANTHER	MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN	77	550	-	-
Pvu9g0383	631	PANTHER	MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN	12	55	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g0383	Pvu-Chr9	7733109	7745313	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu9g0383	6	625	Mechanosensitive Ion Channel Family	AT5G10490	50.369	0.0	614

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g0383	K22047		-	gmx:100797302	959.133

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu9g0383	9	7733109	7745313	Pvu9g0383	9	7733109	7745313	ECH

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