Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0383 ATGTTGTGCTCATCGCGTAACCTTGGATTTCATCTCACTTCAATTAGACTGTCTCGCGACGTCAGGCTGTACAGTAATCATGGAAGTTGTTGTTTTTGTCAGAAGCGCGTGCATGGGGATGGATTATGTTTTGTTGCCATTAGTCTTTTGCCACATGGTTTGTTGGGAGGTGGCGTACGTACCATCAGGAGGAGTTTGGCAAGGAGAGCGATTCCGACAACGACGACCATGGACACAGTGGCGATGTCAAGGTCATATAATGCTATAGCGGGAAAACCAATTGCGATTCAATTCATCCCCGCCCTTGGTATTATTGGGTTTGCTGTTTTTGGTCTTGAGCCTCTTGTGCGACTGAGCAGGAATCTGTTTCTCCAAGAAAGTACTGATAGGAGTTGGAAGAAAAGTAGTTCACGTTATATTTTGACATCTTATTTTCGACCTATGCTGCTGTGGACTGGAGTAATGCTCATATGCAGGGATTTAGATCTACTAGTCCTACCATCAGAAACTAGTCAGGCTATCAAGCAACGGCTGCTGAGTTTTGTGAGATCGTTGTCAACTGTGCTTACAATTGCTTACTGTTCTTCAAGCTTAATTCAACAAGCACAAAAATTTTGTATGGAGGCAAGTGGCTCCAGTGATGAAAGAAATATGAGCATTGATTTTACTGGGAAAGCTGTATATACTGCAATTTGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTATCTCCACACAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTCTTGATTTCCCTTGCAGGTCGTGAGATATTTACAAACTTCCTTTCGAGTATGATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAAATTAAAGGATACGAGGTTACTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAATTAGAGGTTCTGATTGTGAAGCAATTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGGAATCTTAGTAAGAAATCTCATTGGCGTATAAAGACTCGTCTGGCTATCAGTCACTTGGATGTTAACAAGATTAATAGTATAATAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCCCAAGTAGAGCAAAGAAAATTGCACAGAAGGGTTTTTCTAGAGAACATTGATCCAGAAAATCAGGCTCTTATGATATTGGTATCCTGCTTTGTTAAAACTTCACGTTCTGAAGAGTACCTGCGTGTAAAGGAGGCAATCCTCTTGGATCTTCTCAGAGTTATAAGTCATCATCGAGCTCGGCTAGCCACACCCATCCGCACAGTTCAGAAGATGTACAGTGATACTGATTTCGATATTGATCCATTTGATGACACCATTTCCACTCGATCCAGATCAAAGAAAAACCGTCCTTTCACACTGATAGATCCACCTTATAAAGTTAAGTCTTCAACTCCTTCAACCATAACAAATGAGGACAGAGATGGTAAGATGGATGAAACCTTGCCATCTGACATCAAAGTAGACTGTGATGAATTTTCTGTTACAGCAAGTTCCATCCAGAAGACCTCCAAATCCCAAAAGCCCAAAAAGGAAAGAGCAGGAAGCACTGGAAAGGAAACAACAACATCAAAGCTAGATGATCAGAAATCTGTTGTTTCCACGTCTTCATCATCATCATCATCACTTAGTCGTTCTTTGGAAGAGAATATTATTCTTGATATTGCTGTGATGGGCTCAGAGAGAACTCTTGCAGTTGATGAAGAATTGGTTAATTCTATCCCTGCAGAATCACAAGAAGTTGCAGCCCATCAGAATGGGAGTGAGTCTCCTATTTGCAAGGATAAGAAGGATGGTGAGATGTCTTCATTGCCTCCTACTAAACAAAAGGATTAA 1896 0.414 MLCSSRNLGFHLTSIRLSRDVRLYSNHGSCCFCQKRVHGDGLCFVAISLLPHGLLGGGVRTIRRSLARRAIPTTTTMDTVAMSRSYNAIAGKPIAIQFIPALGIIGFAVFGLEPLVRLSRNLFLQESTDRSWKKSSSRYILTSYFRPMLLWTGVMLICRDLDLLVLPSETSQAIKQRLLSFVRSLSTVLTIAYCSSSLIQQAQKFCMEASGSSDERNMSIDFTGKAVYTAIWVAAVSLFMELLGISTQKWLTAGGLGTVLISLAGREIFTNFLSSMMIHATRPFVVNERIQTKIKGYEVTGKVEHVGWWSPTIIRGSDCEAIHIPNHNLSVNVVRNLSKKSHWRIKTRLAISHLDVNKINSIIADMRKVLAKNPQVEQRKLHRRVFLENIDPENQALMILVSCFVKTSRSEEYLRVKEAILLDLLRVISHHRARLATPIRTVQKMYSDTDFDIDPFDDTISTRSRSKKNRPFTLIDPPYKVKSSTPSTITNEDRDGKMDETLPSDIKVDCDEFSVTASSIQKTSKSQKPKKERAGSTGKETTTSKLDDQKSVVSTSSSSSSSLSRSLEENIILDIAVMGSERTLAVDEELVNSIPAESQEVAAHQNGSESPICKDKKDGEMSSLPPTKQKD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0383 631 MobiDBLite consensus disorder prediction 457 503 - -
Pvu9g0383 631 Gene3D - 283 336 IPR023408 -
Pvu9g0383 631 MobiDBLite consensus disorder prediction 596 631 - -
Pvu9g0383 631 MobiDBLite consensus disorder prediction 547 565 - -
Pvu9g0383 631 MobiDBLite consensus disorder prediction 518 565 - -
Pvu9g0383 631 Gene3D - 177 282 - -
Pvu9g0383 631 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 77 550 IPR045042 -
Pvu9g0383 631 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 12 55 IPR045042 -
Pvu9g0383 631 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 77 550 - -
Pvu9g0383 631 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 12 55 - -
Pvu9g0383 631 MobiDBLite consensus disorder prediction 610 631 - -
Pvu9g0383 631 Pfam Mechanosensitive ion channel 225 432 IPR006685 GO:0016020|GO:0055085
Pvu9g0383 631 MobiDBLite consensus disorder prediction 525 546 - -
Pvu9g0383 631 SUPERFAMILY Sm-like ribonucleoproteins 268 338 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0383 Pvu-Chr9 7733109 7745313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0383 6 625 Mechanosensitive Ion Channel Family AT5G10490 50.369 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0383 K22047 - gmx:100797302 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0383 9 7733109 7745313 Pvu9g0383 9 7733109 7745313 ECH