Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0382 ATGCTCTGCCCAGGCTCAACTCAATTGTCTCTAGACGTTGGGCTCAACAGTAATATTGGATTCTGTAGTTTTCATCCTCATAACCGAAGGATGGTTGGTCGATTACATTTGGTCACCATAAATGTTTCACCCTGGAGCTTGAAACAAGACTCTTCGGCTCTCCATCTTTTAAGTAGACTACATGCCCCAATAAGGCACGTGCCTTCCAAATGTAAAGTTTTCATATGTCGGTCTGTCTTAATACCAGGTGGAGGGAGTGAAACTCCTCTCATGAAATCTGCCGGTGTTATTTTAACAAGGTCATATGATGCTTTACAAGGAAATCCTGTTTTGCTTCGATTGATCCCAGCCCTTGGTATCATTGCCTTTGCTGTTTGCGGTCTTGAGCCACTCCTTCGAATCAGCAGGGTTTTGTTCCTTCAAAGGACTGACAGCACTTGGAAGAAAAGTAGTTCGCGGTATGCTATGACATCCTACTTTCAGCCATTGTTGTTATGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCAGTAGTCCTACCATCTAAGTCCAGCCAGGTTGTGAAGCAGCGGCTTCTGAATTTTGTGAGATCTTTGTCAACCGTGATTTCATTTGCGTACTGTTTATCAAGTTTAATTCAACAAGCACAAAAATTCTTTCTAGAGGCAAATGACTCCACTGGTGCAAGAAATGTGGGATTTGATTTTGCTGGGAAGGCGGTATATAGTGCTGTTTGGGTTGCTGCCGTGTCGTTGTTCATGGAGCTTTTAGGTTTCTCCACACAGAAGTGGTTAACTGCCGGTGGTTTGGGCACTGTATTGCTCACTCTAGCAGGTCGTGAGATATTTACAAACTTTTTGTCAAGCATAATGATCCATGCAACTCGGCCATTTATTGTGAATGAGTGGATTCAAACAAAAATTGAAGGATACGAGGTTTCTGGCACAGTTGAGCATGTAGGGTGGTGGTCACCAACCATTGTTAGAGGCGATGACCGCGAGGCAGTTCATATTCCTAACCACAAGTTTACTGTAAATGTTGTGAGAAATCTGACTCAAAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTGGACGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCCAAAAATCCTCAAGTAGAACAGCAAAAATTGCATAGAAGGGTCTTTTTGGAGAATGTTAATCCTGAAAATCAGTCTCTTATGATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTACCTCTGTGTTAAGGAGGCAATACTTTTGGATCTACTCAGAGTTGTCAGTCATCATCGAGCCAGACTAGCCACTCCCATCCGCACAGTTCAGAAAATATATAGTGACACTGACTCGGAAAATATACCTTTTGGAGACACAATTTTCACTCGATCTAGAGCTGCAAATCGCCCATTCCTACTGATAGAACCACCATATAAAGTTAATGGTGAAGATAAAGTTAAACCCTCAACCCGTGCAACTCGCACAAACGAGGAAAAAGATTCCAAGATTGATGAAACCATGGCAAGTGACTCCAAAGTAGACGAGAATTTTGGATCAACATCTACCCCTTCAACCGATGTAAACAACTCTAGGGATAAATCCAAGTCATTTTCTGAATCACAGGCTAAAAGGGAAAATGCAGTAGATGAACGAAAGGGAAGTACAGTTCCCGTATCTAGAAACCTGGCTCAAAGTGCTGTGCCTGAAACCTCACCTGTTGCAACCCATGAGACCACTTCTGCTACTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCTTCTGTCTCTTCGTCATCAGTTAGACCTTCATTGGAAGAGAACATTCTTCTTGGGGTTGCCTTAGAAGGCTCAAAACGAACTCTTCCAATCGAAGAAGAAATGACTCCATCTGCTATGCCCCCGGACTCACAAGGATTTGCTGTCCAACGGAACGGTGGTGGACCTCCTGCTAGCAAGGATAAGAAGGATGGTCAGTCTTCATTTCCAACTGGTAAACAGAATGACTAG 2052 0.4245 MLCPGSTQLSLDVGLNSNIGFCSFHPHNRRMVGRLHLVTINVSPWSLKQDSSALHLLSRLHAPIRHVPSKCKVFICRSVLIPGGGSETPLMKSAGVILTRSYDALQGNPVLLRLIPALGIIAFAVCGLEPLLRISRVLFLQRTDSTWKKSSSRYAMTSYFQPLLLWTGAMLICRALDPVVLPSKSSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEANDSTGARNVGFDFAGKAVYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFIVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLSKNPQVEQQKLHRRVFLENVNPENQSLMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSDTDSENIPFGDTIFTRSRAANRPFLLIEPPYKVNGEDKVKPSTRATRTNEEKDSKIDETMASDSKVDENFGSTSTPSTDVNNSRDKSKSFSESQAKRENAVDERKGSTVPVSRNLAQSAVPETSPVATHETTSATSSQSKQDEEKSSVSSSSVRPSLEENILLGVALEGSKRTLPIEEEMTPSAMPPDSQGFAVQRNGGGPPASKDKKDGQSSFPTGKQND* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0382 683 MobiDBLite consensus disorder prediction 527 546 - -
Pvu9g0382 683 MobiDBLite consensus disorder prediction 547 566 - -
Pvu9g0382 683 Gene3D - 298 351 IPR023408 -
Pvu9g0382 683 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Pvu9g0382 683 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 675 IPR045042 -
Pvu9g0382 683 MobiDBLite consensus disorder prediction 572 619 - -
Pvu9g0382 683 MobiDBLite consensus disorder prediction 495 683 - -
Pvu9g0382 683 Gene3D - 195 297 - -
Pvu9g0382 683 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 675 - -
Pvu9g0382 683 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Pvu9g0382 683 MobiDBLite consensus disorder prediction 495 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0382 Pvu-Chr9 7724932 7730595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g0382 9 683 Mechanosensitive Ion Channel Family AT5G10490 57.205 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0382 K22047 - gmx:100777815 1152.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0382 9 7724932 7730595 Pvu9g0382 9 7724932 7730595 ECH