Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g0376 ATGTCAGAGAAGAAGAACAAAGTGTCTTATACGGAAAAAGATGCTGTGGCGCTGATGCAGAGGTACGACCCAACTACGGTGTTCATCTTGCTTCAAGAAGTTGCGCATTACGCTAAGCCAAAGATTGATTGGAACGAGTTGGTGAAGAAAAGTGCGACTGGGATTTCTAATGTTAGGGAATATCAAATGCTGTGGCGGCATTTGGCCTATCGGCATTCTTTGCCGGAAGATTTTGAAGTTGGGGCTGAACCTTTGGATGATGACAGTGACTTAGAGTGCGAGCTAGAAGCATTACCTCCTGTAAGTGGGGAATCTGCATCAGAGGCGGCTGCATGTGTGAAGGTAATGATTGCTTCTCGCACACTAAGTGAATCTGCGCCTAGTAGCTCAACAATCGAGGCTCCATTGACTATAAATATTCCAGTTTGCCATTCATCTAGAACTCTTATTGAAAGTTCACAACCCTCTAATTTGATGCAAGGGACAAACATTGTTTTTCCAGTCACTGTTCAGAGACAAACATTGCCAACACACCCTGCACCATCAACAGATGGTATAGAATCTAAGGGATTAGTTGGTGGTAATCTAGCCTCCAAAAGAAAACGAAAAACATGGTCAGAGGAAGAGGACATACAACTACGAGCTGCTGTTCAGAGATGGGGCGAAGGGAATTGGGCAACCATGGCAAAAGGAGACAACTTTCCTATTAAGAGAAGTCCCACACAGTTAGCACAGAGGTGGAGCATTTTACGAAAGAAAGATGGGACTGTCAATTCTGGAACCATATCAACCAGCACACAATATACTACTGCTGAACAGCTGGCAACCCGACACTCTTTATCTTTAGCCCTTGATATGCCATTAAAAAAGTTAACTGCTCCTGGAGTGTCGGATCCTGTTAAAACATCCATATCAGTTAAAAATCAAATGCAGAATAGAAATATGGTGGAGAAGGTTGTCACTAGTTTTGTACCACCTCAACAGTCATCTCAGCACCCTTCTTTGTTGGGATCTTCTGATCCTTATGTAAAACCTAAATTAGTAGATGAAAAACTAGTCCCGAAGGGTAATATAATTTCAAATCCTGTGCTAAAATCTACTACAGCTGCATCTGGGACACGAACCGATCCTCCTTCAAATCCTCCTTCAAATACTGTATCACAGTTTAAAATGGCTCCAGTAAAACACAGTGAAGACGCAAAGCCTGCAGTGAGTTCTTTGACAAAACCATCCATCTCTGCCAATTTGCCTTCTGATCTCAAGAATAAACCGGTTCCTCCTCTGGCTGATAAAGTTACATGGAAGCAAGGTGTTAATTCCACGAAAGAGTTTAGAGCTTTTGATCCCACCTCTGCACCAAAAGAGACACCAAAAGAGACGACACAAAAGGAACCGCCTAAAGTTACTATTGGAAGCCAGATCAATAACAATTTAGATAAGGGGAGATTAGATACAGGTCAAGGGAAGATCAAACCTATTAGTAGTGGGGAAGCAGGTTTGAAAGATAAAGCAAATCCAGTAACAGATGAAAAAAGTGCTATCAAAGCAAATGCTGAGGTGTACGAAGACGAAGGAAGTGTTAAGAATGCTAGTGATAATAGCAAACTTGACAAGGAAAGCCTAACTTTTAATGAAGACAAGAAACATTCAATTAATGAAAGTTCAAACAATCAAACCATAAATGACAAAAATGTAAATTTGTCCCTACAAGATGAAGACAGCCAAAGTGCCAAGGTGGTAAAAACTGATGGAGGATGTTGA 1761 0.414 MSEKKNKVSYTEKDAVALMQRYDPTTVFILLQEVAHYAKPKIDWNELVKKSATGISNVREYQMLWRHLAYRHSLPEDFEVGAEPLDDDSDLECELEALPPVSGESASEAAACVKVMIASRTLSESAPSSSTIEAPLTINIPVCHSSRTLIESSQPSNLMQGTNIVFPVTVQRQTLPTHPAPSTDGIESKGLVGGNLASKRKRKTWSEEEDIQLRAAVQRWGEGNWATMAKGDNFPIKRSPTQLAQRWSILRKKDGTVNSGTISTSTQYTTAEQLATRHSLSLALDMPLKKLTAPGVSDPVKTSISVKNQMQNRNMVEKVVTSFVPPQQSSQHPSLLGSSDPYVKPKLVDEKLVPKGNIISNPVLKSTTAASGTRTDPPSNPPSNTVSQFKMAPVKHSEDAKPAVSSLTKPSISANLPSDLKNKPVPPLADKVTWKQGVNSTKEFRAFDPTSAPKETPKETTQKEPPKVTIGSQINNNLDKGRLDTGQGKIKPISSGEAGLKDKANPVTDEKSAIKANAEVYEDEGSVKNASDNSKLDKESLTFNEDKKHSINESSNNQTINDKNVNLSLQDEDSQSAKVVKTDGGC* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g0376 586 MobiDBLite consensus disorder prediction 463 482 - -
Pvu9g0376 586 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
Pvu9g0376 586 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
Pvu9g0376 586 MobiDBLite consensus disorder prediction 364 391 - -
Pvu9g0376 586 MobiDBLite consensus disorder prediction 553 575 - -
Pvu9g0376 586 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Pvu9g0376 586 SMART sant 201 253 IPR001005 -
Pvu9g0376 586 MobiDBLite consensus disorder prediction 503 552 - -
Pvu9g0376 586 MobiDBLite consensus disorder prediction 364 586 - -
Pvu9g0376 586 Pfam Myb-like DNA-binding domain 202 247 IPR001005 -
Pvu9g0376 586 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 427 - -
Pvu9g0376 586 Gene3D - 196 256 - -
Pvu9g0376 586 MobiDBLite consensus disorder prediction 404 418 - -
Pvu9g0376 586 CDD SANT_TRF 203 252 - -
Pvu9g0376 586 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g0376 Pvu-Chr9 7671989 7680380 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu9g0376 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g0376 - - gmx:100805773 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0376 9 7671989 7680380 Pvu9g0376 9 7671989 7680380 ECH
Pvu8g1887 8 48081325 48091722 Pvu9g0376 9 7671989 7680380 PCT